RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 CASD1Q96PB1 797 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 TMEM117Q9H0C3 514 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 BHMT2Q9H2M3 363 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 CHST12Q9NRB3 414 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 AGPAT5Q9NUQ2 364 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 FAM105AQ9NUU6 356 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 DBR1Q9UK59 544 aaKnown RBP10.42□□□□□ -0.74
DDX41-209ENST00000508279 PCDHB12Q9Y5F1 795 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
DDX41-209ENST00000508279 TDRD15B5MCY1 1934 aaKnown RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 E9PMD0 336 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 C5orf67F2Z3F1 127 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 EOMESO95936 686 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 SSBP05455 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX41-209ENST00000508279 ITGB1P05556 798 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 ATF7P17544 494 aaPredicted RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 PDCP20941 246 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 ARL2P36404 184 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PBX3P40426 434 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PRPHP41219 470 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PTENP60484 403 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 MRPS5P82675 430 aaKnown RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 ATP2C1P98194 919 aaPredicted RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 NCBP1Q09161 790 aaKnown RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 PDIA5Q14554 519 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 TIGD5Q53EQ6 642 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 TCEAL5Q5H9L2 206 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 FAM43BQ6ZT52 329 aaPredicted RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 CDR2LQ86X02 465 aaPredicted RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 HSCBQ8IWL3 235 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 LRRC43Q8N309 656 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 IGSF22Q8N9C0 903 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 MCPH1Q8NEM0 835 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 HLA-CQ95604 372 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 CDK5RAP3Q96JB5 506 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 APOL6Q9BWW8 343 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PLVAPQ9BX97 442 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 GBP3Q9H0R5 595 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 NSUN3Q9H649 340 aaKnown RBP10.41□□□□□ -0.74
DDX41-209ENST00000508279 IGFLR1Q9H665 355 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 RNF19AQ9NV58 838 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PLAGL2Q9UPG8 496 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 BRWD1Q9NSI6 2320 aa10.41□□□□□ -0.74
DDX41-209ENST00000508279 MEIS3P2A8K0S8 358 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 SKIP12755 728 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 LAG3P18627 525 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 CYP11B2P19099 503 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 SYT1P21579 422 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 CA8P35219 290 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 KCNQ1P51787 676 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 RNASELQ05823 741 aaKnown RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 LRRC55Q6ZSA7 311 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 BRAPQ7Z569 592 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 ZNF598Q86UK7 904 aaKnown RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 RASSF8Q8NHQ8 419 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 DEPTORQ8TB45 409 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 SPPL3Q8TCT6 385 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 POF1BQ8WVV4 589 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 ATXN2LQ8WWM7 1075 aaKnown RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 PGBD4Q96DM1 585 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 ASB2Q96Q27 587 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
DDX41-209ENST00000508279 CWH43Q9H720 699 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 DNM3Q9UQ16 869 aa10.4□□□□□ -0.74
DDX41-209ENST00000508279 MYH15Q9Y2K3 1946 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 NT5C1B-RDH14C9J2C7 533 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 B4GALT5O43286 388 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 TSPAN1O60635 241 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 ZC3H11AO75152 810 aaKnown RBP eCLIP10.39□□□□□ -0.75
DDX41-209ENST00000508279 FGF18O76093 207 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 MUTP22033 750 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 KCNA5P22460 613 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 DNAJB1P25685 340 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
DDX41-209ENST00000508279 RAB27AP51159 221 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 MBTD1Q05BQ5 628 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 RAD51AP2Q09MP3 1159 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 DHX8Q14562 1220 aaKnown RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 SF3A1Q15459 793 aaKnown RBP10.39□□□□□ -0.75
DDX41-209ENST00000508279 AAK1Q2M2I8 961 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 NOTUMQ6P988 496 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 KCNT2Q6UVM3 1135 aa10.39□□□□□ -0.75
DDX41-209ENST00000508279 GLB1LQ6UWU2 654 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms