RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 DIS3L2Q8IYB7 885 aaKnown RBP23.27■■□□□ 1.32
CLDND1-216ENST00000507944 PSPC1Q8WXF1 523 aaKnown RBP23.27■■□□□ 1.32
CLDND1-216ENST00000507944 NGRNQ9NPE2 291 aaKnown RBP23.27■■□□□ 1.32
CLDND1-216ENST00000507944 ENTPD7Q9NQZ7 604 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 BMP2KQ9NSY1 1161 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-216ENST00000507944 FAM105AQ9NUU6 356 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 PCDHA12Q9UN75 941 aa23.27■■□□□ 1.32
CLDND1-216ENST00000507944 DCXO43602 365 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 ZNF623O75123 536 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 SLITRK3O94933 977 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 ALDH7A1P49419 539 aaKnown RBP23.26■■□□□ 1.31
CLDND1-216ENST00000507944 RBM10P98175 930 aaKnown RBP23.26■■□□□ 1.31
CLDND1-216ENST00000507944 LAMTOR4Q0VGL1 99 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 CALCRLQ16602 461 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 LONRF3Q496Y0 759 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 SRGAP1Q7Z6B7 1085 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 SLC39A11Q8N1S5 342 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 VN1R2Q8NFZ6 395 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 TCP11Q8WWU5 503 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 RSPH1Q8WYR4 309 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 LPPQ93052 612 aa23.26■■□□□ 1.31
CLDND1-216ENST00000507944 EIF2AK1Q9BQI3 630 aaKnown RBP23.26■■□□□ 1.31
CLDND1-216ENST00000507944 C5orf42Q9H799 3197 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 ASAP2O43150 1006 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 GAS2O43903 313 aaKnown RBP23.25■■□□□ 1.31
CLDND1-216ENST00000507944 RAB27AP51159 221 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 BCAR1P56945 870 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 EMC2Q15006 297 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 TMC7Q7Z402 723 aa23.25■■□□□ 1.31
CLDND1-216ENST00000507944 HIDE1A8MVS5 230 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 NT5C1B-RDH14C9J2C7 533 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 ST3GAL1Q11201 340 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 GLB1LQ6UWU2 654 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 FERMT3Q86UX7 667 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 HSD17B14Q9BPX1 270 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 TTC12Q9H892 705 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-216ENST00000507944 MINDY3Q9H8M7 445 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 AGPAT5Q9NUQ2 364 aa23.24■■□□□ 1.31
CLDND1-216ENST00000507944 USP15Q9Y4E8 981 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-216ENST00000507944 WNT7AO00755 349 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 NEMFO60524 1076 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 TXKP42681 527 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 NOMO2Q5JPE7 1267 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 TMEM184AQ6ZMB5 413 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 RNF149Q8NC42 400 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 PGBD4Q96DM1 585 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 MTRQ99707 1265 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 LIMCH1Q9UPQ0 1083 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 HCN4Q9Y3Q4 1203 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 PCDHB2Q9Y5E7 798 aa23.23■■□□□ 1.31
CLDND1-216ENST00000507944 MEIS3P2A8K0S8 358 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 PRR33A8MZF0 331 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 OFD1O75665 1012 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 LYPLA2O95372 231 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 SRGAP2BP0DMP2 458 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 KCNC3Q14003 757 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 MRPL43Q8N983 215 aaKnown RBP23.22■■□□□ 1.31
CLDND1-216ENST00000507944 TMEM169Q96HH4 297 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 MTMR9Q96QG7 549 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 TBC1D13Q9NVG8 400 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 INPP5FQ9Y2H2 1132 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 ARID2Q68CP9 1835 aa23.22■■□□□ 1.31
CLDND1-216ENST00000507944 ZC3H11AO75152 810 aaKnown RBP eCLIP23.21■■□□□ 1.31
CLDND1-216ENST00000507944 HOXA11P31270 313 aaPredicted RBP23.21■■□□□ 1.31
CLDND1-216ENST00000507944 TECP42680 631 aa23.21■■□□□ 1.31
CLDND1-216ENST00000507944 SMC1AQ14683 1233 aaKnown RBP23.21■■□□□ 1.31
CLDND1-216ENST00000507944 SAFBQ15424 915 aaKnown RBP eCLIP23.21■■□□□ 1.31
CLDND1-216ENST00000507944 MRPL10Q7Z7H8 261 aaKnown RBP23.21■■□□□ 1.31
CLDND1-216ENST00000507944 RNF135Q8IUD6 432 aa23.21■■□□□ 1.31
CLDND1-216ENST00000507944 NRDE2Q9H7Z3 1164 aa23.21■■□□□ 1.31
CLDND1-216ENST00000507944 XPNPEP1Q9NQW7 623 aa23.21■■□□□ 1.31
CLDND1-216ENST00000507944 ANKEF1Q9NU02 776 aa23.21■■□□□ 1.31
CLDND1-216ENST00000507944 CARNS1A5YM72 827 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 ATP2B1P20020 1258 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 GUCY1B3Q02153 619 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 RNASELQ05823 741 aaKnown RBP23.2■■□□□ 1.3
CLDND1-216ENST00000507944 MXD4Q14582 209 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-216ENST00000507944 BMS1Q14692 1282 aaKnown RBP23.2■■□□□ 1.3
CLDND1-216ENST00000507944 ANKRD54Q6NXT1 300 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 LLGL2Q6P1M3 1020 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 CCDC83Q8IWF9 413 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 PHF7Q9BWX1 381 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-216ENST00000507944 MUTYHQ9UIF7 546 aa23.2■■□□□ 1.3
CLDND1-216ENST00000507944 C2orf71A6NGG8 1288 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 LOC730098B7Z3J9 87 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 CXCL14O95715 111 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 GALTP07902 379 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 PTENP60484 403 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 UBXN11Q5T124 520 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 AGMOQ6ZNB7 445 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 VPS52Q8N1B4 723 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 SUSD6Q92537 303 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 S1PR5Q9H228 398 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 TMEM60Q9H2L4 133 aa23.19■■□□□ 1.3
CLDND1-216ENST00000507944 ARIH1Q9Y4X5 557 aaPredicted RBP23.19■■□□□ 1.3
CLDND1-216ENST00000507944 DGAT1O75907 488 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 ERLIN2O94905 339 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 MCM7P33993 719 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 TFDP1Q14186 410 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms