RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 CASC1Q6TDU7 716 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 TMTC3Q6ZXV5 915 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 HEATR3Q7Z4Q2 680 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 ADGRD2Q7Z7M1 963 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 RPAINQ86UA6 219 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 NLRX1Q86UT6 975 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 MICU3Q86XE3 530 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 RHBDD1Q8TEB9 315 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 APBB2Q92870 758 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 CUL5Q93034 780 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 GPRASP2Q96D09 838 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 PABPC5Q96DU9 382 aaKnown RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 BTBD6Q96KE9 485 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 TMX1Q9H3N1 280 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 NSUN3Q9H649 340 aaKnown RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 JADE2Q9NQC1 790 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 KCNH7Q9NS40 1196 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 ERAP1Q9NZ08 941 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 SERTAD1Q9UHV2 236 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 TUBE1Q9UJT0 475 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 ZNF215Q9UL58 517 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 BRPF3Q9ULD4 1205 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 PADI3Q9ULW8 664 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 MRPL42Q9Y6G3 142 aaKnown RBP7.42□□□□□ -1.22
NEDD4-206ENST00000507063 BRWD1Q9NSI6 2320 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 NLRC5Q86WI3 1866 aa7.42□□□□□ -1.22
NEDD4-206ENST00000507063 C5orf67F2Z3F1 127 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 MGEA5O60502 916 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CAND2O75155 1236 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 TBX10O75333 385 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 DGKIO75912 1065 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CCNE2O96020 404 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CPA1P15085 419 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 KIF5BP33176 963 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CLDN10P78369 228 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 MRPS6P82932 125 aaKnown RBP7.41□□□□□ -1.22
NEDD4-206ENST00000507063 ZP2Q05996 745 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 TRAF1Q13077 416 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 BTG3Q14201 252 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-206ENST00000507063 EML3Q32P44 896 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 ADCK5Q3MIX3 580 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 TIGD5Q53EQ6 642 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 XRRA1Q6P2D8 792 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 TRMT1LQ7Z2T5 733 aaKnown RBP7.41□□□□□ -1.22
NEDD4-206ENST00000507063 RBM23Q86U06 439 aaKnown RBP7.41□□□□□ -1.22
NEDD4-206ENST00000507063 C1orf216Q8TAB5 229 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
NEDD4-206ENST00000507063 SAMD11Q96NU1 681 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 PPP1R16BQ96T49 567 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 ARID3AQ99856 593 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 MXRA8Q9BRK3 442 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 LZTS2Q9BRK4 669 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 CRISPLD1Q9H336 500 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 SMARCAD1Q9H4L7 1026 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 PLAGL2Q9UPG8 496 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 ADGRA3Q8IWK6 1321 aa7.41□□□□□ -1.22
NEDD4-206ENST00000507063 SPDYE3A6NKU9 549 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 FAM86B1E9PN63 330 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 PER2O15055 1255 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 MBTPS2O43462 519 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 ITGB1P05556 798 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 FAM86B2P0C5J1 330 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 ATP4AP20648 1035 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 CDC27P30260 824 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 LIFRP42702 1097 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 ACTR2P61160 394 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 EXOSC10Q01780 885 aaKnown RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 FAM102BQ5T8I3 360 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 TAF2Q6P1X5 1199 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 MTHFD1LQ6UB35 978 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 TSHZ1Q6ZSZ6 1077 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 KLHL23Q8NBE8 558 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 GIMAP8Q8ND71 665 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 SPPL3Q8TCT6 385 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 TMEM87BQ96K49 555 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 SUV39H2Q9H5I1 410 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 AGO4Q9HCK5 861 aaKnown RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 JPH1Q9HDC5 661 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 ANO2Q9NQ90 1003 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 SLC9A2Q9UBY0 812 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 MUTYHQ9UIF7 546 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 GINS2Q9Y248 185 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
NEDD4-206ENST00000507063 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.22
NEDD4-206ENST00000507063 MYO7AQ13402 2215 aa7.39□□□□□ -1.23
NEDD4-206ENST00000507063 SMCO2A6NFE2 343 aa7.39□□□□□ -1.23
NEDD4-206ENST00000507063 PRR33A8MZF0 331 aa7.39□□□□□ -1.23
NEDD4-206ENST00000507063 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
NEDD4-206ENST00000507063 STXBP3O00186 592 aa7.39□□□□□ -1.23
NEDD4-206ENST00000507063 MEIS1O00470 390 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms