RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 ARID2Q68CP9 1835 aa9.77□□□□□ -0.85
SCAMP1-202ENST00000506858 SCN5AQ14524 2016 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 H0YGN5 161 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 BIN1O00499 593 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 KLRC4O43908 158 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 CD52P31358 61 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 CASP5P51878 434 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 NFX1Q12986 1120 aaKnown RBP9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 BFSP2Q13515 415 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 ZC2HC1CQ53FD0 456 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 HERC4Q5GLZ8 1057 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 ODR4Q5SWX8 454 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 RSPH3Q86UC2 560 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 TCP11Q8WWU5 503 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 JPH2Q9BR39 696 aaPredicted RBP9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 CUEDC2Q9H467 287 aa9.76□□□□□ -0.85
SCAMP1-202ENST00000506858 INO80B-WBP1J3KQ70 363 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 B4GALT5O43286 388 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 TBCAO75347 108 aaKnown RBP9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 MYBP10242 640 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 PLS3P13797 630 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 CRYBB1P53674 252 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 KCNA1Q09470 495 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 DPYDQ12882 1025 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 COASYQ13057 564 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 POSTNQ15063 836 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM26DQ5JW98 314 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 FBXO47Q5MNV8 452 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 C16orf59Q7L2K0 433 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 TAS1R3Q7RTX0 852 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM228AQ86W67 206 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 SMYD4Q8IYR2 804 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 NME8Q8N427 588 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 DEPTORQ8TB45 409 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 CAGE1Q8TC20 777 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 KIFAP3Q92845 792 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 IFT74Q96LB3 600 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 FIZ1Q96SL8 496 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 SEZ6LQ9BYH1 1024 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 INO80BQ9C086 356 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 PARVGQ9HBI0 331 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 SLC39A2Q9NP94 309 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 KMT5AQ9NQR1 393 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 USP25Q9UHP3 1055 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 MAPK8IP1Q9UQF2 711 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 PPME1Q9Y570 386 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 PCDHA5Q9Y5H7 936 aa9.75□□□□□ -0.85
SCAMP1-202ENST00000506858 TISP43B9A030 160 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 M0QZ92 97 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 PRPF6O94906 941 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RPN1P04843 607 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 DARSP14868 501 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 EIF4BP23588 611 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RGS19P49795 217 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 ZNF131P52739 623 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 PTENP60484 403 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 AMPD3Q01432 767 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 MXD4Q14582 209 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RPAINQ86UA6 219 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 KCTD17Q8N5Z5 321 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 DBF4BQ8NFT6 615 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 CPB2Q96IY4 423 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 DRC1Q96MC2 740 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 GCOM2Q9BZD3 368 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 CLSTN2Q9H4D0 955 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 ST3GAL5Q9UNP4 418 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 GDAQ9Y2T3 454 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 LAMA3Q16787 3333 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 LOXHD1Q8IVV2 1947 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 DENND3A2RUS2 1198 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 ASAP2O43150 1006 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 GAS2O43903 313 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TRAK2O60296 914 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 MGEA5O60502 916 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RPS6KA5O75582 802 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 MBTD1Q05BQ5 628 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RBL2Q08999 1139 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 STK4Q13043 487 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 DMP1Q13316 513 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 MFSD5Q6N075 450 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 UNC13DQ70J99 1090 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TMCO2Q7Z6W1 182 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 RTN4RL1Q86UN2 441 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 FAM178BQ8IXR5 827 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 CCDC65Q8IXS2 484 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 EXOC8Q8IYI6 725 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 CCDC155Q8N6L0 562 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TMEM161BQ8NDZ6 487 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 ZBTB45Q96K62 511 aaPredicted RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TIGD1Q96MW7 591 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 PYM1Q9BRP8 204 aaKnown RBP9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
SCAMP1-202ENST00000506858 MRPL44Q9H9J2 332 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms