RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 PADI3Q9ULW8 664 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 ST3GAL5Q9UNP4 418 aa14.19□□□□□ -0.14
TCOF1-210ENST00000506767 PVALEFA0A1B0GWK0 134 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 LRRIQ4A6NIV6 560 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 GOLGA6L22H0YM25 854 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 GPR182O15218 404 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-210ENST00000506767 KLRC4O43908 158 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TRAK2O60296 914 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
TCOF1-210ENST00000506767 CSDE1O75534 798 aaKnown RBP14.18□□□□□ -0.14
TCOF1-210ENST00000506767 ACRP10323 421 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
TCOF1-210ENST00000506767 GAP43P17677 238 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 NCKAP1LP55160 1127 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 MBTD1Q05BQ5 628 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 EHHADHQ08426 723 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 PCBP1Q15365 356 aaKnown RBP eCLIP14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TMEM240Q5SV17 173 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 ODR4Q5SWX8 454 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 CNKSR3Q6P9H4 555 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TMEM161BQ8NDZ6 487 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 SEPT8Q92599 483 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 APBB2Q92870 758 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 CCDC113Q9H0I3 377 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 C2orf40Q9H1Z8 148 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 BLZF1Q9H2G9 400 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 FZD8Q9H461 694 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TMEM134Q9H6X4 195 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 KMT5AQ9NQR1 393 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 PANK4Q9NVE7 773 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 DACT1Q9NYF0 836 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 SEL1LQ9UBV2 794 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 TRIOBPQ9H2D6 2365 aa14.18□□□□□ -0.14
TCOF1-210ENST00000506767 CCDC169A6NNP5 214 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 IDEP14735 1019 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 FGFR4P22455 802 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 SFPQP23246 707 aaKnown RBP eCLIP14.17□□□□□ -0.14
TCOF1-210ENST00000506767 MCM4P33991 863 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 BMP8BP34820 402 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 EFNA5P52803 228 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 SMTNP53814 917 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 ASIC1P78348 528 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 DPYDQ12882 1025 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 PAK2Q13177 524 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 AMHR2Q16671 573 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 PSRC1Q6PGN9 363 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-210ENST00000506767 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 UNC13DQ70J99 1090 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 SFR1Q86XK3 245 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 ZBTB8OSQ8IWT0 167 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 CCDC65Q8IXS2 484 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.148e-9■□□□□ 10.5
TCOF1-210ENST00000506767 KIFC3Q9BVG8 833 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 ST6GALNAC4Q9H4F1 302 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 OLFML3Q9NRN5 406 aa14.17□□□□□ -0.14
TCOF1-210ENST00000506767 INO80B-WBP1J3KQ70 363 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 SLC16A4O15374 487 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
TCOF1-210ENST00000506767 FGBP02675 491 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 SCP2P22307 547 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
TCOF1-210ENST00000506767 COASYQ13057 564 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 DSC3Q14574 896 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 POSTNQ15063 836 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 HERC4Q5GLZ8 1057 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-210ENST00000506767 TAS1R3Q7RTX0 852 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 ZNF720Q7Z2F6 126 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 HAUS6Q7Z4H7 955 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 RTN4RL1Q86UN2 441 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-210ENST00000506767 FAM178BQ8IXR5 827 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 SLC17A8Q8NDX2 589 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 CCDC34Q96HJ3 373 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 PRIMPOLQ96LW4 560 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 FTHL17Q9BXU8 183 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 PRO3102Q9H379 93 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 ZHX3Q9H4I2 956 aa14.16□□□□□ -0.14
TCOF1-210ENST00000506767 PRMT7Q9NVM4 692 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-210ENST00000506767 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-210ENST00000506767 ABHD14A-ACY1A0A1B0GW23 586 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 H0YCG3 227 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 K7ERI5 159 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 ACKR2O00590 384 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 MGEA5O60502 916 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 TSPAN1O60635 241 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 PPP1R37O75864 691 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 BAIAP3O94812 1187 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 EDN1P05305 212 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 ACTN1P12814 892 aa14.15□□□□□ -0.14
TCOF1-210ENST00000506767 NMT1P30419 496 aaKnown RBP14.15□□□□□ -0.14
TCOF1-210ENST00000506767 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-210ENST00000506767 GTF2BQ00403 316 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms