RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 RPS6KB1P23443 525 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PSMA5P28066 241 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 GPC1P35052 558 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 SLC1A4P43007 532 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ID4P47928 161 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 GCLCP48506 637 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 NNTQ13423 1086 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 TOB2Q14106 344 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 GRM4Q14833 912 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 WTAPQ15007 396 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 FAM110CQ1W6H9 321 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RPS26P11Q5JNZ5 115 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 IFIT1BQ5T764 474 aaKnown RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 BLOC1S2Q6QNY1 142 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 UNC5AQ6ZN44 842 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RUFY3Q7L099 469 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RALYLQ86SE5 291 aaKnown RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PCGF5Q86SE9 256 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 CNTD1Q8N815 330 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 GRIN3AQ8TCU5 1115 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 COG1Q8WTW3 980 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 KCTD12Q96CX2 325 aaKnown RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ATG4CQ96DT6 458 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ITPKCQ96DU7 683 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 TCEANC2Q96MN5 208 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 JAKMIP1Q96N16 626 aaKnown RBP5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PRRX2Q99811 253 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 LRRC2Q9BYS8 371 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PBX4Q9BYU1 374 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RHOBTB2Q9BYZ6 727 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 EPN3Q9H201 632 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ZHX3Q9H4I2 956 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 SLC38A10Q9HBR0 1119 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 CD320Q9NPF0 282 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 BRD7Q9NPI1 651 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 MAD2L2Q9UI95 211 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 LZTS1Q9Y250 596 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 RABGAP1Q9Y3P9 1069 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 ZNF536O15090 1300 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 PKD1L2Q7Z442 2459 aa5.62□□□□□ -1.51
CPNE4-207ENST00000506687 A0A0G2JMZ2 1700 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 A0A1W2PNR3 127 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM232C9JQI7 657 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 AGRPO00253 132 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 CYTH3O43739 400 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 FLOT1O75955 427 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 COL11A1P12107 1806 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 CASTP20810 708 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 SMARCA1P28370 1054 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TRAPPC10P48553 1259 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 RPIAP49247 311 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ERVK-24P63145 666 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TMPRSS15P98073 1019 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 RPL6Q02878 288 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 POU4F2Q12837 409 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 MAP7Q14244 749 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM132BQ14DG7 1078 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 SART3Q15020 963 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ACAP1Q15027 740 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 SV2CQ496J9 727 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 GPATCH4Q5T3I0 446 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ERAP2Q6P179 960 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 LLGL2Q6P1M3 1020 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 PKN3Q6P5Z2 889 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 Q6ZUG5 572 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 KCTD1Q719H9 257 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 FAM160B2Q86V87 743 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TPH2Q8IWU9 490 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 MICALL1Q8N3F8 863 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ANKRD13CQ8N6S4 541 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 MB21D1Q8N884 522 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 GPRC5AQ8NFJ5 357 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 CHURC1Q8WUH1 139 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 TBC1D32Q96NH3 1257 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 PNMA5Q96PV4 448 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 SLF1Q9BQI6 1058 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 PAGR1Q9BTK6 254 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 MRPL4Q9BYD3 311 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ZCCHC2Q9C0B9 1178 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 RANBP17Q9H2T7 1088 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 RIOX1Q9H6W3 641 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 KAT14Q9H8E8 782 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 OSGEPQ9NPF4 335 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 LUC7LQ9NQ29 371 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ARHGEF4Q9NR80 690 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 GJD2Q9UKL4 321 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ZNF214Q9UL59 606 aaPredicted RBP5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ATP11BQ9Y2G3 1177 aa5.61□□□□□ -1.51
CPNE4-207ENST00000506687 ZNFX1Q9P2E3 1918 aaKnown RBP5.6□□□□□ -1.51
CPNE4-207ENST00000506687 MGAMO43451 1857 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms