RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CDC42EP1Q00587 391 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 ECM1Q16610 540 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 FAM173BQ6P4H8 233 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 HFE2Q6ZVN8 426 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 KSR1Q8IVT5 923 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 GCOM2Q9BZD3 368 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 LMAN2LQ9H0V9 348 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 TMX1Q9H3N1 280 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 ZSCAN16Q9H4T2 348 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 XPNPEP1Q9NQW7 623 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 DDX19AQ9NUU7 478 aaKnown RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
TCOF1-209ENST00000506630 KIAA1024Q9UPX6 916 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 RWDD3Q9Y3V2 267 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 ATG2AQ2TAZ0 1938 aa14.58□□□□□ -0.08
TCOF1-209ENST00000506630 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 MGEA5O60502 916 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 MUTP22033 750 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 FGFR4P22455 802 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 CDC25AP30304 524 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 LAMTOR4Q0VGL1 99 aa14.57□□□□□ -0.08
TCOF1-209ENST00000506630 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
TCOF1-209ENST00000506630 SMAD2Q15796 467 aaKnown RBP14.57□□□□□ -0.08
TCOF1-209ENST00000506630 FOXD4L5Q5VV16 416 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-209ENST00000506630 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
TCOF1-209ENST00000506630 FOXD4L4Q8WXT5 416 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-209ENST00000506630 CSDE1O75534 798 aaKnown RBP14.56□□□□□ -0.08
TCOF1-209ENST00000506630 LINC00271P0C7V0 271 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
TCOF1-209ENST00000506630 BMPR1AP36894 532 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 LTBRP36941 435 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 CEBPZQ03701 1054 aaKnown RBP14.56□□□□□ -0.08
TCOF1-209ENST00000506630 CLUL1Q15846 466 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 CTC1Q2NKJ3 1217 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 MAEAQ7L5Y9 396 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 ADAM2Q99965 735 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 INO80BQ9C086 356 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-209ENST00000506630 POLR3FQ9H1D9 316 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-209ENST00000506630 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
TCOF1-209ENST00000506630 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 ASAP2O43150 1006 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 MBTPS2O43462 519 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 ZSCAN20P17040 1043 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-209ENST00000506630 MXD4Q14582 209 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-209ENST00000506630 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-209ENST00000506630 PADI6Q6TGC4 694 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 RNF149Q8NC42 400 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 MCPH1Q8NEM0 835 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
TCOF1-209ENST00000506630 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 RGS18Q9NS28 235 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 C1orf112Q9NSG2 853 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 LRFN2Q9ULH4 789 aa14.55□□□□□ -0.08
TCOF1-209ENST00000506630 TDRD15B5MCY1 1934 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 E9PMD0 336 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 GRM6O15303 877 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 EYA4O95677 639 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 STAG3L1P0CL83 205 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 ZSCAN22P10073 491 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PDIA4P13667 645 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 MARCKSP29966 332 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PHKA2P46019 1235 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 SARSP49591 514 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 GRIN1Q05586 938 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 HYAL1Q12794 435 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 SMAD4Q13485 552 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 TFDP1Q14186 410 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 BECN1Q14457 450 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PTPAQ15257 358 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 FAM102BQ5T8I3 360 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 CATSPER4Q7RTX7 472 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 CABP7Q86V35 215 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 RNF135Q8IUD6 432 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 NPAS4Q8IUM7 802 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 ASAP3Q8TDY4 903 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 EDAQ92838 391 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PPP2R3CQ969Q6 453 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 AK8Q96MA6 479 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 USP28Q96RU2 1077 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PLIN2Q99541 437 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 IGFLR1Q9H665 355 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 RC3H2Q9HBD1 1191 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 IFT122Q9HBG6 1241 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 GPRC5CQ9NQ84 441 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 DNM3Q9UQ16 869 aa14.54□□□□□ -0.08
TCOF1-209ENST00000506630 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
TCOF1-209ENST00000506630 ADGRA3Q8IWK6 1321 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 F13A1P00488 732 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 GLRA2P23416 452 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 ARL2P36404 184 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 LONP1P36776 959 aaKnown RBP14.53□□□□□ -0.08
TCOF1-209ENST00000506630 GATMP50440 423 aa14.53□□□□□ -0.08
TCOF1-209ENST00000506630 DLX2Q07687 328 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms