RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 MINDY3Q9H8M7 445 aa18.47■□□□□ 0.55
SNCA-209ENST00000506244 RALGAPA2Q2PPJ7 1873 aa18.47■□□□□ 0.55
SNCA-209ENST00000506244 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
SNCA-209ENST00000506244 CDH23Q9H251 3354 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 PPP6R2O75170 966 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 ARHGEF15O94989 841 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 EOMESO95936 686 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 PLA2G4BP0C869 781 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 GUCY2CP25092 1073 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 FAM189BP81408 668 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 GRIN1Q05586 938 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 MBTD1Q05BQ5 628 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 DMP1Q13316 513 aaPredicted RBP18.46■□□□□ 0.55
SNCA-209ENST00000506244 RINT1Q6NUQ1 792 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 NOTUMQ6P988 496 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 KCNK18Q7Z418 384 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 ECHDC2Q86YB7 292 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 ABI1Q8IZP0 508 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 SYT2Q8N9I0 419 aaPredicted RBP18.46■□□□□ 0.55
SNCA-209ENST00000506244 LINC00301Q8NCQ3 95 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 DEPTORQ8TB45 409 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 KCNG4Q8TDN1 519 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 PRIMPOLQ96LW4 560 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 PRMT7Q9NVM4 692 aaPredicted RBP18.46■□□□□ 0.55
SNCA-209ENST00000506244 CFAP45Q9UL16 551 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
SNCA-209ENST00000506244 COL4A4P53420 1690 aaPredicted RBP18.45■□□□□ 0.54
SNCA-209ENST00000506244 SPTLC2O15270 562 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
SNCA-209ENST00000506244 PLCG1P19174 1290 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 EFNA5P52803 228 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 KARSQ15046 597 aaKnown RBP18.45■□□□□ 0.54
SNCA-209ENST00000506244 FBXO22Q8NEZ5 403 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 SYMPKQ92797 1274 aaKnown RBP18.45■□□□□ 0.54
SNCA-209ENST00000506244 PLIN2Q99541 437 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 RUSC1Q9BVN2 902 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 CERS4Q9HA82 394 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
SNCA-209ENST00000506244 KCNG1Q9UIX4 513 aa18.45■□□□□ 0.54
SNCA-209ENST00000506244 TSPAN1O60635 241 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 HIP1RO75146 1068 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 SLC12A3P55017 1021 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 PKP1Q13835 747 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 MAPK6Q16659 721 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 C1orf186Q6ZWK4 172 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 RNF169Q8NCN4 708 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 TMEM117Q9H0C3 514 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 FAM105AQ9NUU6 356 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
SNCA-209ENST00000506244 NLRC5Q86WI3 1866 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 TBKBP1A7MCY6 615 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 BRD1O95696 1058 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 CTNNB1P35222 781 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 FAM187BQ17R55 369 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 PAN2Q504Q3 1202 aaKnown RBP18.43■□□□□ 0.54
SNCA-209ENST00000506244 CCDC73Q6ZRK6 1079 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 TMEM192Q8IY95 271 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 LRRC43Q8N309 656 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 BSNDQ8WZ55 320 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 LARP4BQ92615 738 aaKnown RBP18.43■□□□□ 0.54
SNCA-209ENST00000506244 RAD54LQ92698 747 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 CLP1Q92989 425 aaKnown RBP18.43■□□□□ 0.54
SNCA-209ENST00000506244 CLIC6Q96NY7 704 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 C17orf80Q9BSJ5 609 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 C11orf84Q9BUA3 381 aaPredicted RBP18.43■□□□□ 0.54
SNCA-209ENST00000506244 PLVAPQ9BX97 442 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 MRPL9Q9BYD2 267 aaKnown RBP18.43■□□□□ 0.54
SNCA-209ENST00000506244 ODF2LQ9ULJ1 636 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 CNTNAP2Q9UHC6 1331 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 CHD9Q3L8U1 2897 aa18.43■□□□□ 0.54
SNCA-209ENST00000506244 ZNF623O75123 536 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 RB1P06400 928 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 FGFR1P11362 822 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 EPC2Q52LR7 807 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 SPECC1Q5M775 1068 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 ZNF598Q86UK7 904 aaKnown RBP18.42■□□□□ 0.54
SNCA-209ENST00000506244 GPBP1Q86WP2 473 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 HACE1Q8IYU2 909 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 EPSTI1Q96J88 318 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 TRIM6Q9C030 488 aaPredicted RBP18.42■□□□□ 0.54
SNCA-209ENST00000506244 AAASQ9NRG9 546 aa18.42■□□□□ 0.54
SNCA-209ENST00000506244 TFIP11Q9UBB9 837 aaKnown RBP18.42■□□□□ 0.54
SNCA-209ENST00000506244 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
SNCA-209ENST00000506244 MRPL42Q9Y6G3 142 aaKnown RBP18.42■□□□□ 0.54
SNCA-209ENST00000506244 FNDC1Q4ZHG4 1894 aaPredicted RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 MYO9BQ13459 2157 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 CARNS1A5YM72 827 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 CCDC169A6NNP5 214 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 C5orf67F2Z3F1 127 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 H0YCG3 227 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 CUTAO60888 179 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 PRKCBP05771 671 aa18.41■□□□□ 0.54
SNCA-209ENST00000506244 KRT18P05783 430 aaKnown RBP18.41■□□□□ 0.54
SNCA-209ENST00000506244 ATF7P17544 494 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms