RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SLC27A2O14975 620 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 ADH1AP07327 375 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 EPCAMP16422 314 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 NPR3P17342 541 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 GBP2P32456 591 aaPredicted RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 CIITAP33076 1130 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 CLCN4P51793 760 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 FGD1P98174 961 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 KRT32Q14532 448 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 PCBP1Q15365 356 aaKnown RBP eCLIP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 XKR3Q5GH77 459 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 JAKMIP3Q5VZ66 844 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 CWF19L1Q69YN2 538 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 LRRC71Q8N4P6 559 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 RUBCNQ92622 972 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 PGBD1Q96JS3 809 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 KLHL5Q96PQ7 755 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 WDR6Q9NNW5 1121 aaKnown RBP11.15□□□□□ -0.62
NEDD9-210ENST00000505589 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.62
NEDD9-210ENST00000505589 PLXNA3P51805 1871 aa11.15□□□□□ -0.63
NEDD9-210ENST00000505589 CNTNAP2Q9UHC6 1331 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PI15O43692 258 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 OFD1O75665 1012 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 URODP06132 367 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 SRFP11831 508 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 NECTIN1Q15223 517 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PTPN14Q15678 1187 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PRR16Q569H4 304 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 CREB3L3Q68CJ9 461 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 DHX32Q7L7V1 743 aaKnown RBP11.14□□□□□ -0.63
NEDD9-210ENST00000505589 CATSPER4Q7RTX7 472 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 GPR65Q8IYL9 337 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 CRYGNQ8WXF5 182 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 TEKT3Q9BXF9 490 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 TBC1D13Q9NVG8 400 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 EPS15L1Q9UBC2 864 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PIN4Q9Y237 131 aaKnown RBP11.14□□□□□ -0.63
NEDD9-210ENST00000505589 PPME1Q9Y570 386 aa11.14□□□□□ -0.63
NEDD9-210ENST00000505589 MYH9P35579 1960 aaKnown RBP11.14□□□□□ -0.63
NEDD9-210ENST00000505589 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 CCDC195A0A1B0GUA6 201 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 GOLGA8BA8MQT2 603 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 ASAP2O43150 1006 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 GAS7O60861 476 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 SOD2P04179 222 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 MAGEA9P43362 315 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 PRKCEQ02156 737 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 CREMQ03060 361 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 C1orf210Q8IVY1 113 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 SLC44A3Q8N4M1 653 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 EXOC6Q8TAG9 804 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD9-210ENST00000505589 SUCLA2Q9P2R7 463 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-210ENST00000505589 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
NEDD9-210ENST00000505589 CDH22Q9UJ99 828 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
NEDD9-210ENST00000505589 A0A087WZ62 844 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 IGKV6-21A0A0C4DH24 114 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 LILRB3O75022 631 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 MAFO75444 373 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 GLUD1P00367 558 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 CFHP08603 1231 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 CNPP09543 421 aaKnown RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 AK2P54819 239 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 IRX6P78412 446 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 TARBP2Q15633 366 aaKnown RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 MIER3Q7Z3K6 550 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 SRGAP1Q7Z6B7 1085 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 RHPN2Q8IUC4 686 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 HACE1Q8IYU2 909 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 PHKBQ93100 1093 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 RPS6KC1Q96S38 1066 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 FDXACB1Q9BRP7 624 aaPredicted RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 LSG1Q9H089 658 aaKnown RBP11.12□□□□□ -0.63
NEDD9-210ENST00000505589 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 SMOC2Q9H3U7 446 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 RSAD1Q9HA92 442 aa11.12□□□□□ -0.63
NEDD9-210ENST00000505589 PRR5-ARHGAP8B1AHC4 643 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 NRP1O14786 923 aa11.11□□□□□ -0.63
NEDD9-210ENST00000505589 NCAM2O15394 837 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms