RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 TMEM143Q96AN5 459 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 TMEM169Q96HH4 297 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 CEP170P1Q96L14 293 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 LXNQ9BS40 222 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
SNHG4-202ENST00000505522 AGPAT5Q9NUQ2 364 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
SNHG4-202ENST00000505522 TECTAO75443 2155 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 M0R296 226 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 TBX3O15119 743 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 B4GALT3O60512 393 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 DKC1O60832 514 aaKnown RBP eCLIP13.66□□□□□ -0.221e-323■■■■■ 141.5
SNHG4-202ENST00000505522 CLASP2O75122 1294 aaKnown RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 ZNF623O75123 536 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 OFD1O75665 1012 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 CXCL14O95715 111 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 SKIP12755 728 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 XBP1P17861 261 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 CA8P35219 290 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 RAB27AP51159 221 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 AK2P54819 239 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 EPHA7Q15375 998 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 VPS52Q8N1B4 723 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 CASP10Q92851 521 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
SNHG4-202ENST00000505522 DNAJB4Q9UDY4 337 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
SNHG4-202ENST00000505522 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 MARCH6O60337 910 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 LARGE1O95461 756 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 GALTP07902 379 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
SNHG4-202ENST00000505522 NHLH1Q02575 133 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 CTTNQ14247 550 aaKnown RBP13.65□□□□□ -0.22
SNHG4-202ENST00000505522 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SNHG4-202ENST00000505522 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
SNHG4-202ENST00000505522 ZNF280BQ86YH2 543 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
SNHG4-202ENST00000505522 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 IGSF21Q96ID5 467 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 VN1R3Q9BXE9 311 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 GBP3Q9H0R5 595 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 PPME1Q9Y570 386 aa13.65□□□□□ -0.22
SNHG4-202ENST00000505522 ARID2Q68CP9 1835 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 KRT2P35908 639 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 RFC5P40937 340 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 SLC11A1P49279 550 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 AFF1P51825 1210 aaKnown RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 ANAPC15P60006 121 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 RNASELQ05823 741 aaKnown RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 EMC2Q15006 297 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 ME3Q16798 604 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 TPRNQ4KMQ1 711 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 OTUD6AQ7L8S5 288 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 EXOC8Q8IYI6 725 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
SNHG4-202ENST00000505522 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 POMKQ9H5K3 350 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 ZNF318Q5VUA4 2279 aa13.64□□□□□ -0.23
SNHG4-202ENST00000505522 WNT7AO00755 349 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 DDHD2O94830 711 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 SLITRK3O94933 977 aa13.63□□□□□ -0.23
SNHG4-202ENST00000505522 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms