RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 A0A1B0GUA9 196 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 MAPK13O15264 365 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 ZNF623O75123 536 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 POSTNQ15063 836 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 ZPBP2Q6X784 338 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 GPBP1Q86WP2 473 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 SLC7A3Q8WY07 619 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 C2orf40Q9H1Z8 148 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 CGNQ9P2M7 1197 aaKnown RBP9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRPC6Q9Y210 931 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 SAMM50Q9Y512 469 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 MTCL1Q9Y4B5 1905 aaKnown RBP9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 ARHGEF35A5YM69 484 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 DNAJB3Q8WWF6 145 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 MED15Q96RN5 788 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 IL23AQ9NPF7 189 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRANK1O15050 2925 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 DCDC2CA8MYV0 355 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 MBD3O95983 291 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 CLCN3P51790 818 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 EFNA5P52803 228 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 MCL1Q07820 350 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 KIF26AQ9ULI4 1882 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 TRAF3IP3Q9Y228 551 aa9.17□□□□□ -0.94
CDC42SE2-208ENST00000505065 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 OBSL1O75147 1896 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 ATF7P17544 494 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 POLGP54098 1239 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 SOX10P56693 466 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 HTRA4P83105 476 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 NAB2Q15742 525 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 CNKSR3Q6P9H4 555 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 AGO3Q9H9G7 860 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 PARVGQ9HBI0 331 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 GREB1Q4ZG55 1949 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 H0YCG3 227 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 PAPLNO95428 1278 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 CASP5P51878 434 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 AMPD3Q01432 767 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 ACO2Q99798 780 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 BPIFA3Q9BQP9 254 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 TNFSF13BQ9Y275 285 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 ACKR2O00590 384 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 MGEA5O60502 916 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 RPN1P04843 607 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 EPHB4P54760 987 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 DHX58Q96C10 678 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 USP20Q9Y2K6 914 aa9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 NOC2LQ9Y3T9 749 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-208ENST00000505065 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 PPP1R3GB7ZBB8 358 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 C9IYK1 514 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 TGFB1I1O43294 461 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 KMT5BQ4FZB7 885 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 CXorf38Q8TB03 319 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 HIPK3Q9H422 1215 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 PDZD7Q9H5P4 517 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 PRPF40AO75400 957 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 TMOD1P28289 359 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 SP4Q02446 784 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 ZNF658Q5TYW1 1059 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 CENPPQ6IPU0 288 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 LRRC71Q8N4P6 559 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 TMEM143Q96AN5 459 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 KIAA1468Q9P260 1216 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 MAN1B1Q9UKM7 699 aa9.15□□□□□ -0.94
CDC42SE2-208ENST00000505065 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM240Q5SV17 173 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 DACT1Q9NYF0 836 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 TBX20Q9UMR3 447 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 ADSSP30520 456 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 TFDP1Q14186 410 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 ADSSL1Q8N142 457 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 PRMT7Q9NVM4 692 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.95
CDC42SE2-208ENST00000505065 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 EFCAB14O75071 495 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 VTNP04004 478 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 CRELD2Q6UXH1 353 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 GRAMD1CQ8IYS0 662 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 SMG8Q8ND04 991 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 PHOSPHO2Q8TCD6 241 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 PANK4Q9NVE7 773 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 TRAK2O60296 914 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 PHKA2P46019 1235 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms