RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ERVK-21P61565 698 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 TWF2Q6IBS0 349 aaKnown RBP22.88■■□□□ 1.25
DDR1-255ENST00000504927 ZBTB8OSQ8IWT0 167 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 FIBCD1Q8N539 461 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 MYLIPQ8WY64 445 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 EPSTI1Q96J88 318 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 DRC1Q96MC2 740 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 SAMD11Q96NU1 681 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 CLIC6Q96NY7 704 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 C17orf75Q9HAS0 396 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 RC3H2Q9HBD1 1191 aaKnown RBP22.88■■□□□ 1.25
DDR1-255ENST00000504927 AGPAT5Q9NUQ2 364 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 STXBP5LQ9Y2K9 1186 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 ATP6V1DQ9Y5K8 247 aa22.88■■□□□ 1.25
DDR1-255ENST00000504927 LRRIQ4A6NIV6 560 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 SSBP05455 408 aaKnown RBP eCLIP22.87■■□□□ 1.25
DDR1-255ENST00000504927 DDIT3P35638 169 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 SLC12A3P55017 1021 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 MBTD1Q05BQ5 628 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 BTG3Q14201 252 aaPredicted RBP22.87■■□□□ 1.25
DDR1-255ENST00000504927 KARSQ15046 597 aaKnown RBP22.87■■□□□ 1.25
DDR1-255ENST00000504927 ECHDC2Q86YB7 292 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 CMTR2Q8IYT2 770 aaKnown RBP22.87■■□□□ 1.25
DDR1-255ENST00000504927 KCNG4Q8TDN1 519 aa22.87■■□□□ 1.25
DDR1-255ENST00000504927 DAXXQ9UER7 740 aaPredicted RBP22.87■■□□□ 1.25
DDR1-255ENST00000504927 MYO9BQ13459 2157 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 UNC80Q8N2C7 3258 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 ZNF623O75123 536 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 PLCG1P19174 1290 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 HOXA11P31270 313 aaPredicted RBP22.86■■□□□ 1.25
DDR1-255ENST00000504927 RAB27AP51159 221 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 EFNA5P52803 228 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 SPECC1Q5M775 1068 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 CDCA2Q69YH5 1023 aaPredicted RBP22.86■■□□□ 1.25
DDR1-255ENST00000504927 SPRED2Q7Z698 418 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 DEPTORQ8TB45 409 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 SYMPKQ92797 1274 aaKnown RBP22.86■■□□□ 1.25
DDR1-255ENST00000504927 CCDC51Q96ER9 411 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 PRIMPOLQ96LW4 560 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 GAS2L1Q99501 681 aaPredicted RBP22.86■■□□□ 1.25
DDR1-255ENST00000504927 RUSC1Q9BVN2 902 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 PRDM12Q9H4Q4 367 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 RWDD3Q9Y3V2 267 aa22.86■■□□□ 1.25
DDR1-255ENST00000504927 ADGRA3Q8IWK6 1321 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 HIP1RO75146 1068 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 FOXD4L6Q3SYB3 417 aaPredicted RBP22.85■■□□□ 1.25
DDR1-255ENST00000504927 NOTUMQ6P988 496 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 FOXD4L3Q6VB84 417 aaPredicted RBP22.85■■□□□ 1.25
DDR1-255ENST00000504927 USP49Q70CQ1 688 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 ARNTL2Q8WYA1 636 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 RSPH1Q8WYR4 309 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 BSNDQ8WZ55 320 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 RAD54LQ92698 747 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 PRMT7Q9NVM4 692 aaPredicted RBP22.85■■□□□ 1.25
DDR1-255ENST00000504927 ZDHHC9Q9Y397 364 aa22.85■■□□□ 1.25
DDR1-255ENST00000504927 TSPAN1O60635 241 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 CUTAO60888 179 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 IBSPP21815 317 aaPredicted RBP22.84■■□□□ 1.25
DDR1-255ENST00000504927 DMP1Q13316 513 aaPredicted RBP22.84■■□□□ 1.25
DDR1-255ENST00000504927 MAPK6Q16659 721 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 FAM187BQ17R55 369 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 RRAGBQ5VZM2 374 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 PPP4R3CPQ6ZMV5 832 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 CCDC73Q6ZRK6 1079 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 ZNF598Q86UK7 904 aaKnown RBP22.84■■□□□ 1.25
DDR1-255ENST00000504927 CLP1Q92989 425 aaKnown RBP22.84■■□□□ 1.25
DDR1-255ENST00000504927 FZD8Q9H461 694 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 CERS4Q9HA82 394 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 POLD4Q9HCU8 107 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 BLOC1S4Q9NUP1 217 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 FAM105AQ9NUU6 356 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 STK17AQ9UEE5 414 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 RBM19Q9Y4C8 960 aaKnown RBP22.84■■□□□ 1.25
DDR1-255ENST00000504927 REV3LO60673 3130 aa22.84■■□□□ 1.25
DDR1-255ENST00000504927 PHLPP2Q6ZVD8 1323 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 FOSL2P15408 326 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 DNM1Q05193 864 aaKnown RBP22.83■■□□□ 1.25
DDR1-255ENST00000504927 TMEM192Q8IY95 271 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 DAW1Q8N136 415 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 CNNM3Q8NE01 707 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 LARP4BQ92615 738 aaKnown RBP22.83■■□□□ 1.25
DDR1-255ENST00000504927 PGBD4Q96DM1 585 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 NTPCRQ9BSD7 190 aaKnown RBP22.83■■□□□ 1.25
DDR1-255ENST00000504927 TMEM117Q9H0C3 514 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 RCOR1Q9UKL0 485 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 PCDHB2Q9Y5E7 798 aa22.83■■□□□ 1.25
DDR1-255ENST00000504927 COL4A6Q14031 1691 aa22.83■■□□□ 1.24
DDR1-255ENST00000504927 CCDC169A6NNP5 214 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 TBKBP1A7MCY6 615 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 RB1P06400 928 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 SMTNP53814 917 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 PEX3P56589 373 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 MCM6Q14566 821 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 AMHR2Q16671 573 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 EPC2Q52LR7 807 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 ARSHQ5FYA8 562 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 ABI1Q8IZP0 508 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 ODF2LQ9ULJ1 636 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 A0A0C4DFX4 3053 aa22.82■■□□□ 1.24
DDR1-255ENST00000504927 A0A1B0GUA9 196 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms