RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 NOTUMQ6P988 496 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 GLB1LQ6UWU2 654 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 CABP7Q86V35 215 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 ECHDC2Q86YB7 292 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 LRRC43Q8N309 656 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 LPPQ93052 612 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 ZNF689Q96CS4 500 aaPredicted RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 INTS4Q96HW7 963 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 CPB2Q96IY4 423 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 FAM193BQ96PV7 902 aaPredicted RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 APOL6Q9BWW8 343 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 MRPL9Q9BYD2 267 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 TMEM117Q9H0C3 514 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 NT5C3AQ9H0P0 336 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 IGFLR1Q9H665 355 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 ELAC1Q9H777 363 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 FAM105AQ9NUU6 356 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 PUF60Q9UHX1 559 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
SPOP-208ENST00000504889 EVPLQ92817 2033 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 COL6A3P12111 3177 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 LOXHD1Q8IVV2 1947 aa6.58□□□□□ -1.36
SPOP-208ENST00000504889 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 WDR81Q562E7 1941 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 A0A0U1RQF3 1178 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 SPDYE4A6NLX3 237 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 STX6O43752 255 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 NR1I2O75469 434 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 EOMESO95936 686 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ITGA4P13612 1032 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 LAG3P18627 525 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 GLRA2P23416 452 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 AXLP30530 894 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 MATR3P43243 847 aaKnown RBP eCLIP6.57□□□□□ -1.364e-7■■■■■ 40.6
SPOP-208ENST00000504889 ALDH7A1P49419 539 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 MRPS5P82675 430 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 ATP2C1P98194 919 aaPredicted RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 KRT17Q04695 432 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 DMP1Q13316 513 aaPredicted RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 PRPF4BQ13523 1007 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 BMS1Q14692 1282 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 MAPK6Q16659 721 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 CSPP1Q1MSJ5 1256 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ARL6IP4Q66PJ3 421 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 IGSF22Q8N9C0 903 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 KLHL23Q8NBE8 558 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ASAP3Q8TDY4 903 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 POF1BQ8WVV4 589 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 SYMPKQ92797 1274 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 KIFAP3Q92845 792 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 HLA-CQ95604 372 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 MRPL38Q96DV4 380 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 AK8Q96MA6 479 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 DRC1Q96MC2 740 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ZNF558Q96NG5 402 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 CEP89Q96ST8 783 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ADPGKQ9BRR6 497 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 PLVAPQ9BX97 442 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ZSCAN16Q9H4T2 348 aaPredicted RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 POLD4Q9HCU8 107 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 XPNPEP1Q9NQW7 623 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 PRDM6Q9NQX0 595 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 ENTPD7Q9NQZ7 604 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 AGPAT5Q9NUQ2 364 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 TYW1Q9NV66 732 aaKnown RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 PRMT7Q9NVM4 692 aaPredicted RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 LMCD1Q9NZU5 365 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 DAXXQ9UER7 740 aaPredicted RBP6.57□□□□□ -1.36
SPOP-208ENST00000504889 CCDC39Q9UFE4 941 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 PARP2Q9UGN5 583 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 PCDHB2Q9Y5E7 798 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 NLRC5Q86WI3 1866 aa6.57□□□□□ -1.36
SPOP-208ENST00000504889 RALGAPA2Q2PPJ7 1873 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 COL4A6Q14031 1691 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 DLL1O00548 723 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 GRM6O15303 877 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 TSPAN1O60635 241 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 HIP1RO75146 1068 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 FGF18O76093 207 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 NPTXRO95502 500 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 EYA4O95677 639 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 POMCP01189 267 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 PRKCBP05771 671 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 CYP11B2P19099 503 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 KCNA5P22460 613 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 MARCKSP29966 332 aaPredicted RBP6.56□□□□□ -1.36
SPOP-208ENST00000504889 PPM1AP35813 382 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 ARL2P36404 184 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 LONP1P36776 959 aaKnown RBP6.56□□□□□ -1.36
SPOP-208ENST00000504889 PBX3P40426 434 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 NAMPTP43490 491 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 NDUFV1P49821 464 aa6.56□□□□□ -1.36
SPOP-208ENST00000504889 SMTNP53814 917 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms