RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TRIM60Q495X7 471 aa22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 COBLL1Q53SF7 1204 aa22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 CDCA2Q69YH5 1023 aaPredicted RBP22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 ADSSL1Q8N142 457 aa22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 GUF1Q8N442 669 aaKnown RBP22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 DNAJC25Q9H1X3 360 aa22.46■■□□□ 1.19
CDC42SE2-206ENST00000503291 K7ERI5 159 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 EIF3DO15371 548 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 PHKA2P46019 1235 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 TLE2Q04725 743 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 ALCAMQ13740 583 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 TRIM71Q2Q1W2 868 aaKnown RBP22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 ANO6Q4KMQ2 910 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 UBE2Q1Q7Z7E8 422 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 ZBTB8OSQ8IWT0 167 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 ZNF710Q8N1W2 664 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 ABHD8Q96I13 439 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 TOX2Q96NM4 488 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 NFKBIZQ9BYH8 718 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 EFNA5P52803 228 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 MRPS6P82932 125 aaKnown RBP22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 STIM1Q13586 685 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 KLHL10Q6JEL2 608 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 C11orf57Q6ZUT1 292 aaPredicted RBP22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 CELF4Q9BZC1 486 aaKnown RBP22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 C2orf40Q9H1Z8 148 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 TMEM134Q9H6X4 195 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 TBX20Q9UMR3 447 aa22.45■■□□□ 1.18
CDC42SE2-206ENST00000503291 DCDC2CA8MYV0 355 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 TLR3O15455 904 aaKnown RBP22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 HOXD13P35453 343 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 BMT2Q1RMZ1 405 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 LRRC26Q2I0M4 334 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 TAS1R3Q7RTX0 852 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 IFNLR1Q8IU57 520 aaPredicted RBP22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 NELFCDQ8IXH7 590 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 KCNN1Q92952 543 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 OSMRQ99650 979 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 MINDY3Q9H8M7 445 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 DACH1Q9UI36 760 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 CDY2AQ9Y6F7 541 aa22.44■■□□□ 1.18
CDC42SE2-206ENST00000503291 M0QZ92 97 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 CSDE1O75534 798 aaKnown RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 KIF20AO95235 890 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 CHRNA1P02708 482 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 CTSHP09668 335 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 SCP2P22307 547 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 ABCD1P33897 745 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 PPP1R2P41236 205 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 CRYBB1P53674 252 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 L1TD1Q5T7N2 865 aaKnown RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 GCOM2Q9BZD3 368 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 ATP11BQ9Y2G3 1177 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 INO80B-WBP1J3KQ70 363 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 FAAP100Q0VG06 881 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 DHTKD1Q96HY7 919 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 INO80BQ9C086 356 aaPredicted RBP22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 TRPV2Q9Y5S1 764 aa22.43■■□□□ 1.18
CDC42SE2-206ENST00000503291 PSMA7O14818 248 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 IQCF3P0C7M6 154 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 CKBP12277 381 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 EIF4BP23588 611 aaKnown RBP22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 MBTD1Q05BQ5 628 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 KNOP1Q1ED39 458 aaKnown RBP22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 SRGAP1Q7Z6B7 1085 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 HVCN1Q96D96 273 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 ACCSQ96QU6 501 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 CCDC113Q9H0I3 377 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 TSPY26PQ9H489 355 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 UBE4BO95155 1302 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 PHLPP2Q6ZVD8 1323 aa22.42■■□□□ 1.18
CDC42SE2-206ENST00000503291 CAND2O75155 1236 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 DARSP14868 501 aaKnown RBP22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 MGAT3Q09327 533 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 STRN3Q13033 797 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 MAPK6Q16659 721 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 ZNF618Q5T7W0 954 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 CAGE1Q8TC20 777 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 TMEM40Q8WWA1 233 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 IKZF4Q9H2S9 585 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 KCTD10Q9H3F6 313 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 FZD8Q9H461 694 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 TMEM206Q9H813 350 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 CT47A1Q5JQC4 288 aaPredicted RBP22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 MAP4K3Q8IVH8 894 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 SYCP3Q8IZU3 236 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 NELFBQ8WX92 580 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 NAT10Q9H0A0 1025 aaKnown RBP22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 SEMA6BQ9H3T3 888 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 USP20Q9Y2K6 914 aa22.41■■□□□ 1.18
CDC42SE2-206ENST00000503291 ERCC5P28715 1186 aaPredicted RBP22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 FAM26DQ5JW98 314 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 CENPPQ6IPU0 288 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 CTNND2Q9UQB3 1225 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 PRKCBP05771 671 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 ZNF165P49910 485 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 PMS1P54277 932 aaKnown RBP22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 STX17P56962 302 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 RBL2Q08999 1139 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 PAK1Q13153 545 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms