RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TTC12Q9H892 705 aaPredicted RBP18.17■□□□□ 0.5
SCLT1-204ENST00000503215 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 HIDE1A8MVS5 230 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 DKC1O60832 514 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCLT1-204ENST00000503215 HOXA11P31270 313 aaPredicted RBP18.16■□□□□ 0.5
SCLT1-204ENST00000503215 RFC5P40937 340 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 SMAD4Q13485 552 aaKnown RBP18.16■□□□□ 0.5
SCLT1-204ENST00000503215 TRIM29Q14134 588 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 PSPC1Q8WXF1 523 aaKnown RBP18.16■□□□□ 0.5
SCLT1-204ENST00000503215 TRAIPQ9BWF2 469 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 FAM105AQ9NUU6 356 aa18.16■□□□□ 0.5
SCLT1-204ENST00000503215 B4GALT3O60512 393 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 NEMFO60524 1076 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 MCM7P33993 719 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
SCLT1-204ENST00000503215 DUSP6Q16828 381 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 CSPP1Q1MSJ5 1256 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 OTUD6AQ7L8S5 288 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 TMEM173Q86WV6 379 aaPredicted RBP18.15■□□□□ 0.5
SCLT1-204ENST00000503215 ADHFE1Q8IWW8 467 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 SLC39A11Q8N1S5 342 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 RNF149Q8NC42 400 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 PPP2R3CQ969Q6 453 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 TCF25Q9BQ70 676 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 INO80BQ9C086 356 aaPredicted RBP18.15■□□□□ 0.5
SCLT1-204ENST00000503215 AGPAT5Q9NUQ2 364 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 SPG21Q9NZD8 308 aa18.15■□□□□ 0.5
SCLT1-204ENST00000503215 POTEMA6NI47 508 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 OFD1O75665 1012 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 EYA4O95677 639 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 BCAR1P56945 870 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 ASAP3Q8TDY4 903 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 FAM50BQ9Y247 325 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 LZTS1Q9Y250 596 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 INPP5FQ9Y2H2 1132 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
SCLT1-204ENST00000503215 EIF5BO60841 1220 aaKnown RBP18.13■□□□□ 0.49
SCLT1-204ENST00000503215 ZNF623O75123 536 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 LYPLA2O95372 231 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 SPATA31C1P0DKV0 1188 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 COASYQ13057 564 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 ZNF174Q15697 407 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 TMEM31Q5JXX7 168 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 AGMOQ6ZNB7 445 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 SRGAP1Q7Z6B7 1085 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 SMRP1Q8NCR6 262 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 BCL7CQ8WUZ0 217 aaPredicted RBP18.13■□□□□ 0.49
SCLT1-204ENST00000503215 C8orf76Q96K31 380 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 MTRQ99707 1265 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 NRDE2Q9H7Z3 1164 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 ENTPD7Q9NQZ7 604 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 TBC1D13Q9NVG8 400 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 PRKAG3Q9UGI9 489 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 PUF60Q9UHX1 559 aaKnown RBP18.13■□□□□ 0.49
SCLT1-204ENST00000503215 PPME1Q9Y570 386 aa18.13■□□□□ 0.49
SCLT1-204ENST00000503215 KCNC3Q14003 757 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 NOMO2Q5JPE7 1267 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 ZNF280BQ86YH2 543 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 TCP11Q8WWU5 503 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 APOL5Q9BWW9 433 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 DNAJB4Q9UDY4 337 aa18.12■□□□□ 0.49
SCLT1-204ENST00000503215 USP15Q9Y4E8 981 aaPredicted RBP18.12■□□□□ 0.49
SCLT1-204ENST00000503215 GPR37L1O60883 481 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 ZC3H11AO75152 810 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCLT1-204ENST00000503215 MED24O75448 989 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 PPM1AP35813 382 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 ARL2P36404 184 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 RARRES1P49788 294 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 PTENP60484 403 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 KRT17Q04695 432 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 PDE12Q6L8Q7 609 aaKnown RBP18.11■□□□□ 0.49
SCLT1-204ENST00000503215 LLGL2Q6P1M3 1020 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 GLB1LQ6UWU2 654 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 MRPL10Q7Z7H8 261 aaKnown RBP18.11■□□□□ 0.49
SCLT1-204ENST00000503215 EXOC8Q8IYI6 725 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 LLPHQ9BRT6 129 aaKnown RBP18.11■□□□□ 0.49
SCLT1-204ENST00000503215 ANKEF1Q9NU02 776 aa18.11■□□□□ 0.49
SCLT1-204ENST00000503215 ASAP2O43150 1006 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 GALTP07902 379 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 GLRA2P23416 452 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 TECP42680 631 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 ALDH7A1P49419 539 aaKnown RBP18.1■□□□□ 0.49
SCLT1-204ENST00000503215 CAPSQ13938 189 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 NBR1Q14596 966 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCLT1-204ENST00000503215 SYCE2Q6PIF2 218 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 MAEAQ7L5Y9 396 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 CATSPER3Q86XQ3 398 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 MRPL43Q8N983 215 aaKnown RBP18.1■□□□□ 0.49
SCLT1-204ENST00000503215 SMG8Q8ND04 991 aaKnown RBP18.1■□□□□ 0.49
SCLT1-204ENST00000503215 FBXO18Q8NFZ0 1043 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 CPB2Q96IY4 423 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 VN1R3Q9BXE9 311 aa18.1■□□□□ 0.49
SCLT1-204ENST00000503215 EIF2AQ9BY44 585 aaKnown RBP18.1■□□□□ 0.49
SCLT1-204ENST00000503215 MRPL9Q9BYD2 267 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms