RNA–Protein interactions for RNA: ENST00000503042.5

CLPTM1L-202, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 3,540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-202ENST00000503042 ARMCX3Q9UH62 379 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 APBA1Q02410 837 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 SP4Q02446 784 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 ABHD15Q6UXT9 468 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 CEP57Q86XR8 500 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 PLS3P13797 630 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 ICAM3P32942 547 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 ACTR2P61160 394 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 CEP120Q8N960 986 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 DUSP10Q9Y6W6 482 aa12.1□□□□□ -0.47
CLPTM1L-202ENST00000503042 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 ARID2Q68CP9 1835 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 K7ENM7 598 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 TUBBP07437 444 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 EDNRBP24530 442 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 CXCR5P32302 372 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 PAFAH1B1P43034 410 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 ZNF513Q8N8E2 541 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 JPH2Q9BR39 696 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 LARSQ9P2J5 1176 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 LRRC53A6NM62 1247 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 ZNF185O15231 689 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 MAPTP10636 758 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 CCT5P48643 541 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 CDK17Q00537 523 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 C2orf54Q08AI8 447 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 DPY19L2P1Q6NXN4 242 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 TSGA10Q9BZW7 698 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 LUC7LQ9NQ29 371 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 DMAC2Q9NW81 257 aa12.09□□□□□ -0.47
CLPTM1L-202ENST00000503042 ZEB2O60315 1214 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 PSAPP07602 524 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 MAGEA1P43355 309 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 SEPT14Q6ZU15 432 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 CCDC43Q96MW1 224 aaKnown RBP12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 SUFUQ9UMX1 484 aa12.08□□□□□ -0.47
CLPTM1L-202ENST00000503042 BUB1O43683 1085 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 MAP1SQ66K74 1059 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 FASTKD5Q7L8L6 764 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 SLC35C1Q96A29 364 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 FGD4Q96M96 766 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 TIPINQ9BVW5 301 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 ARHGAP20Q9P2F6 1191 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 MOCS3O95396 460 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 XRCC5P13010 732 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 EIF4A3P38919 411 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 KIF11P52732 1056 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 DCAF17Q5H9S7 520 aaPredicted RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 FAM102BQ5T8I3 360 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 PDXDC1Q6P996 788 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 CCDC170Q8IYT3 715 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 EDEM3Q9BZQ6 932 aa12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
CLPTM1L-202ENST00000503042 SYNGAP1Q96PV0 1343 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 TISP43B9A030 160 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 NCKAP1LP55160 1127 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 PEX3P56589 373 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 CCDC91Q7Z6B0 441 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 TRIM58Q8NG06 486 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 GANQ9H2C0 597 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 CEP72Q9P209 647 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 IGSF9BQ9UPX0 1349 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 ATG7O95352 703 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 SLC25A27O95847 323 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 PGK2P07205 417 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 SUPT20HL2P0C7V6 817 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 ATP4AP20648 1035 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 ACTN2P35609 894 aa12.07□□□□□ -0.48
CLPTM1L-202ENST00000503042 PSMC2P35998 433 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms