RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 RAVER2Q9HCJ3 691 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 ZBTB40Q9NUA8 1239 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 AATFQ9NY61 560 aaKnown RBP eCLIP6.14□□□□□ -1.43
FXN-205ENST00000498653 PLEKHB1Q9UF11 243 aaPredicted RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 NRCAMQ92823 1304 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 GOLGA4Q13439 2230 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 NBASA2RRP1 2371 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 PCSK5Q92824 1860 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 TTC24A2A3L6 582 aaPredicted RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 BCLAF3A2AJT9 711 aaKnown RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 TRABD2BA6NFA1 517 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 PATE3B3GLJ2 98 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 CAND2O75155 1236 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 RPP40O75818 363 aaKnown RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 ARIH2O95376 493 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 CAVIN2O95810 425 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 ITGB2P05107 769 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 NBPF7P0C2Y1 421 aaPredicted RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 FTH1P19P0C7X4 201 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 HOXB4P17483 251 aaPredicted RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 HOXC8P31273 242 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 SOX11P35716 441 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 ALDH7A1P49419 539 aaKnown RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 PRR20EP86478 221 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 PRR20CP86479 221 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 PRR20DP86480 221 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 PRR20BP86481 221 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 PRR20AP86496 221 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 ATP8B2P98198 1209 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 RHDQ02161 417 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 SEMA3FQ13275 785 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 SPTY2D1Q68D10 685 aaPredicted RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 PARM1Q6UWI2 310 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 ZNF852Q6ZMS4 543 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 TMC7Q7Z402 723 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 ADGRA1Q86SQ6 560 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 MRGPRX2Q96LB1 330 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 SLF1Q9BQI6 1058 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 CWH43Q9H720 699 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 HOMER2Q9NSB8 354 aa6.13□□□□□ -1.43
FXN-205ENST00000498653 GNL3LQ9NVN8 582 aaKnown RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 MYO5AQ9Y4I1 1855 aaKnown RBP6.13□□□□□ -1.43
FXN-205ENST00000498653 CCDC194A0A1B0GVG4 234 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 LDHCP07864 332 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 FBXO45P0C2W1 286 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 ZNF286BP0CG31 522 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 GHRP10912 638 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 HOXA6P31267 233 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 CXADRP78310 365 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 GSTO1P78417 241 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 CREB5Q02930 508 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 GABPAQ06546 454 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 KIAA0753Q2KHM9 967 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 EML3Q32P44 896 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 PLK5Q496M5 336 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 PKDCCQ504Y2 493 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 FAM26DQ5JW98 314 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 RTN4RL1Q86UN2 441 aaPredicted RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 RPAP2Q8IXW5 612 aaPredicted RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 SNIP1Q8TAD8 396 aaKnown RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 DOCK6Q96HP0 2047 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 C1QTNF2Q9BXJ5 285 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 ZMYND15Q9H091 742 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 C1orf115Q9H7X2 142 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 ACAD9Q9H845 621 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 EHMT1Q9H9B1 1298 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 NDRG2Q9UN36 371 aaKnown RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 TNRC6BQ9UPQ9 1833 aaKnown RBP6.12□□□□□ -1.43
FXN-205ENST00000498653 CABIN1Q9Y6J0 2220 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 APCP25054 2843 aa6.12□□□□□ -1.43
FXN-205ENST00000498653 GREB1LQ9C091 1923 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 MEFVO15553 781 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 B4GALT3O60512 393 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 HMMRO75330 724 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 LUC7L3O95232 432 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 ADORA1P30542 326 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PBX3P40426 434 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PFKPQ01813 784 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 ICA1Q05084 483 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 LPIN1Q14693 890 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 SPOUT1Q5T280 376 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 CCDC102BQ68D86 513 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 CEP85Q6P2H3 762 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 LRRC47Q8N1G4 583 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 SPEM1Q8N4L4 309 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 ANKRD44Q8N8A2 993 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 CMASQ8NFW8 434 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 STAMQ92783 540 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 GLG1Q92896 1179 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 NUP88Q99567 741 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 CCDC8Q9H0W5 538 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 BICC1Q9H694 974 aaKnown RBP6.11□□□□□ -1.43
FXN-205ENST00000498653 SLC38A10Q9HBR0 1119 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 HEBP1Q9NRV9 189 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
FXN-205ENST00000498653 PKD2L1Q9P0L9 805 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms