RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 SKIP12755 728 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 PLCG1P19174 1290 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 NAMPTP43490 491 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 RAB27AP51159 221 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 ERVK-21P61565 698 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 FAM189BP81408 668 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 MBTD1Q05BQ5 628 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 TMEM132AQ24JP5 1023 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 ECHDC2Q86YB7 292 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 CMTR2Q8IYT2 770 aaKnown RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 LINC00301Q8NCQ3 95 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 ELAC1Q9H777 363 aaKnown RBP12.99□□□□□ -0.33
MRPL55-234ENST00000497758 KCND2Q9NZV8 630 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
MRPL55-234ENST00000497758 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 HIP1RO75146 1068 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 IGFBP4P22692 258 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 AXLP30530 894 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 EFNA5P52803 228 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 DHX8Q14562 1220 aaKnown RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 CDCA2Q69YH5 1023 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 NOTUMQ6P988 496 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 CRIPAKQ8N1N5 446 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 SYT2Q8N9I0 419 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 FBXO22Q8NEZ5 403 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 C17orf80Q9BSJ5 609 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
MRPL55-234ENST00000497758 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 RWDD3Q9Y3V2 267 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
MRPL55-234ENST00000497758 COL4A6Q14031 1691 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 TSPAN1O60635 241 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 PPP6R2O75170 966 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 BRD1O95696 1058 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 EOMESO95936 686 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 KRT18P05783 430 aaKnown RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 FGFR1P11362 822 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 LIG1P18858 919 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 NCLP19338 710 aaKnown RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 CTNNB1P35222 781 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 GATMP50440 423 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 SLC12A3P55017 1021 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 RAD51AP2Q09MP3 1159 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 MAPK6Q16659 721 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 RRAGBQ5VZM2 374 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 SPRED2Q7Z698 418 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 RAD54LQ92698 747 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 TRIM6Q9C030 488 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 TMEM117Q9H0C3 514 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 FAM105AQ9NUU6 356 aa12.97□□□□□ -0.33
MRPL55-234ENST00000497758 PRMT7Q9NVM4 692 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-234ENST00000497758 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 RFXAPO00287 272 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 PRKCBP05771 671 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-234ENST00000497758 ME1P48163 572 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 PEX3P56589 373 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
MRPL55-234ENST00000497758 MCM6Q14566 821 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 CCDC73Q6ZRK6 1079 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 USP49Q70CQ1 688 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 GDPD5Q8WTR4 605 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 LARP4BQ92615 738 aaKnown RBP12.96□□□□□ -0.33
MRPL55-234ENST00000497758 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 PRIMPOLQ96LW4 560 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 C17orf75Q9HAS0 396 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 KMT5AQ9NQR1 393 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 STK17AQ9UEE5 414 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 KCNG1Q9UIX4 513 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.33
MRPL55-234ENST00000497758 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms