RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 TBC1D17Q9HA65 648 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
SRSF4-205ENST00000497015 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
SRSF4-205ENST00000497015 PRPF3O43395 683 aaKnown RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 ATG7O95352 703 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 CDC27P30260 824 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 NTRK3Q16288 839 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 ST13P5Q8NFI4 369 aaPredicted RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 CCDC12Q8WUD4 166 aaPredicted RBP11.1□□□□□ -0.63
SRSF4-205ENST00000497015 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
SRSF4-205ENST00000497015 FANCMQ8IYD8 2048 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 DENND4AQ7Z401 1863 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 IGKV6D-21A0A0A0MT36 114 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 GPR182O15218 404 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 CDKL5O76039 1030 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ADRB1P08588 477 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ATP4AP20648 1035 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.631e-6■■□□□ 14.2
SRSF4-205ENST00000497015 STAT5BP51692 787 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 BCAR1P56945 870 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 PFKFB3Q16875 520 aaPredicted RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ZNF598Q86UK7 904 aaKnown RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 POTEDQ86YR6 584 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 SMARCC2Q8TAQ2 1214 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 OSMRQ99650 979 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 PSTPIP2Q9H939 334 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 BARHL2Q9NY43 387 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 IGSF9Q9P2J2 1179 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 NAP1L2Q9ULW6 460 aaPredicted RBP11.09□□□□□ -0.63
SRSF4-205ENST00000497015 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
SRSF4-205ENST00000497015 BAHCC1Q9P281 2608 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 MAP1BP46821 2468 aaKnown RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 CPLX1O14810 134 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 LILRB3O75022 631 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 CTSAP10619 480 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 PPM1AP35813 382 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 ACTR2P61160 394 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 MTMR1Q13613 665 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 KIAA0319Q5VV43 1072 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 LRRC43Q8N309 656 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 CCDC148Q8NFR7 591 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 MYADMQ96S97 322 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 DZANK1Q9NVP4 752 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 SLC9A2Q9UBY0 812 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 MTF2Q9Y483 593 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 V9GY48 417 aaPredicted RBP11.08□□□□□ -0.64
SRSF4-205ENST00000497015 STK36Q9NRP7 1315 aa11.08□□□□□ -0.64
SRSF4-205ENST00000497015 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 CACNA1IQ9P0X4 2223 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 B4GALT3O60512 393 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 PFKFB2O60825 505 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 CCNE2O96020 404 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 VTNP04004 478 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 GNA11P29992 359 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 CA8P35219 290 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 TIE1P35590 1138 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 CLCN4P51793 760 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 NEK4P51957 841 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 NAPAP54920 295 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-205ENST00000497015 AP3B2Q13367 1082 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
SRSF4-205ENST00000497015 FAM43BQ6ZT52 329 aaPredicted RBP11.07□□□□□ -0.64
SRSF4-205ENST00000497015 CCDC149Q6ZUS6 474 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms