RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ARMC9Q7Z3E5 817 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 GPC2Q8N158 579 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 ETNPPLQ8TBG4 499 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 GLMNQ92990 594 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 CALML4Q96GE6 196 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 CLMNQ96JQ2 1002 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 FAM81BQ96LP2 452 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 WDR11Q9BZH6 1224 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 ALG2Q9H553 416 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 KCNMB3Q9NPA1 279 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 TAB2Q9NYJ8 693 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 UBAP1Q9NZ09 502 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 STXBP5LQ9Y2K9 1186 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 FAN1Q9Y2M0 1017 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 TELO2Q9Y4R8 837 aa6.76□□□□□ -1.33
SSBP1-213ENST00000496622 TMEM150BA6NC51 233 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 RNF225M0QZC1 329 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 POLR2MP0CAP2 368 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 ITGB5P18084 799 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 BACE1P56817 501 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 LONRF1Q17RB8 773 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 TMEM266Q2M3C6 531 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 ZNF658Q5TYW1 1059 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 Q6ZVU0 165 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 MAEAQ7L5Y9 396 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SRLQ86TD4 932 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 KCNN1Q92952 543 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 MUC3BQ9H195 1237 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 WRAP73Q9P2S5 460 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 MYH8P13535 1937 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 IGLV3-22A0A075B6J6 115 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 RSPH10B2B2RC85 870 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 RSPH10BP0C881 870 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SPATA31C1P0DKV0 1188 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SREBF1P36956 1147 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 USP11P51784 963 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 ZNF132P52740 706 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 RPS6P62753 249 aaKnown RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 CCZ1BP86790 482 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 CCZ1P86791 482 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 PAK1Q13153 545 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 DBN1Q16643 649 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 EAPPQ56P03 285 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SPATA1Q5VX52 437 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 ANKRD40Q6AI12 368 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SV2BQ7L1I2 683 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 NELFCDQ8IXH7 590 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 PHTF2Q8N3S3 785 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 AK8Q96MA6 479 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 TAAR1Q96RJ0 339 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 SLF1Q9BQI6 1058 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 TRIM7Q9C029 511 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 PHACTR1Q9C0D0 580 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-213ENST00000496622 DNMT3LQ9UJW3 386 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 MRFAP1Q9Y605 127 aa6.75□□□□□ -1.33
SSBP1-213ENST00000496622 LTBP3Q9NS15 1303 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 USP2O75604 605 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 MYCLP12524 364 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 RRM1P23921 792 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 TPM4P67936 248 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 SP4Q02446 784 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 VGLL4Q14135 290 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 TREML2Q5T2D2 321 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 LEKR1Q6ZMV7 388 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 KRT26Q7Z3Y9 468 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 TPH2Q8IWU9 490 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 SCYL3Q8IZE3 742 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ADSSL1Q8N142 457 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ZNF280CQ8ND82 737 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 USP33Q8TEY7 942 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 RAD54LQ92698 747 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 KIAA1683Q9H0B3 1180 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 BHMT2Q9H2M3 363 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 FEM1BQ9UK73 627 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 RRP15Q9Y3B9 282 aaKnown RBP6.74□□□□□ -1.33
SSBP1-213ENST00000496622 A0A0U1RQJ8 604 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 VWA5AO00534 786 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ATP9AO75110 1047 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 RHOBTB3O94955 611 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 MAGEA9P43362 315 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 KLK7P49862 253 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 CASP5P51878 434 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 MTF1Q14872 753 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 KRT31Q15323 416 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
SSBP1-213ENST00000496622 FAAH2Q6GMR7 532 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms