RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PIK3AP1Q6ZUJ8 805 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 CYP26B1Q9NR63 512 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 KIF3AQ9Y496 699 aa16.09■□□□□ 0.17
CXCL12-208ENST00000496375 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-208ENST00000496375 NT5C1B-RDH14C9J2C7 533 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
CXCL12-208ENST00000496375 KRT2P35908 639 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 BCAR1P56945 870 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 TRIM29Q14134 588 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-208ENST00000496375 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 ANKRD54Q6NXT1 300 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM184AQ6ZMB5 413 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 HFE2Q6ZVN8 426 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 SLC7A3Q8WY07 619 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 SUSD6Q92537 303 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 EDAQ92838 391 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 HAS1Q92839 578 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 LPPQ93052 612 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.16
CXCL12-208ENST00000496375 C8orf76Q96K31 380 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 CEP170P1Q96L14 293 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 TRAIPQ9BWF2 469 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 BRMS1Q9HCU9 246 aa16.08■□□□□ 0.16
CXCL12-208ENST00000496375 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-208ENST00000496375 TECTAO75443 2155 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 K7ELQ4 463 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 TBX3O15119 743 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 MARCH6O60337 910 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 P4HBP07237 508 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 SKIP12755 728 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 ALDH7A1P49419 539 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 SYCE2Q6PIF2 218 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
CXCL12-208ENST00000496375 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 S1PR5Q9H228 398 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 FAM105AQ9NUU6 356 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 COL4A3BPQ9Y5P4 624 aa16.07■□□□□ 0.16
CXCL12-208ENST00000496375 C2orf71A6NGG8 1288 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 MEIS3P2A8K0S8 358 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 ZC3H11AO75152 810 aaKnown RBP eCLIP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 CA8P35219 290 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 POLGP54098 1239 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 NR5A1Q13285 461 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 EPHA7Q15375 998 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 NCAPH2Q6IBW4 605 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 GLB1LQ6UWU2 654 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 MRPL43Q8N983 215 aaKnown RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 PSPC1Q8WXF1 523 aaKnown RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 RSPH1Q8WYR4 309 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM143Q96AN5 459 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM169Q96HH4 297 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 LXNQ9BS40 222 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 DHX33Q9H6R0 707 aaKnown RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 IFT122Q9HBG6 1241 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-208ENST00000496375 INPP5FQ9Y2H2 1132 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 PPME1Q9Y570 386 aa16.06■□□□□ 0.16
CXCL12-208ENST00000496375 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 SRGAP2CP0DJJ0 459 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 GJB2P29033 226 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 RFC5P40937 340 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 RAB27AP51159 221 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 NOMO2Q5JPE7 1267 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-208ENST00000496375 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
CXCL12-208ENST00000496375 CASP10Q92851 521 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 MFSD14AQ96MC6 490 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 NRDE2Q9H7Z3 1164 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 AGPAT5Q9NUQ2 364 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 RGL1Q9NZL6 768 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 HCFC2Q9Y5Z7 792 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 ZNF318Q5VUA4 2279 aa16.05■□□□□ 0.16
CXCL12-208ENST00000496375 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 CLASP2O75122 1294 aaKnown RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 ZNF623O75123 536 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 OFD1O75665 1012 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 CXCL14O95715 111 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 HOXB8P17481 243 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 YWHABP31946 246 aaKnown RBP16.04■□□□□ 0.16
CXCL12-208ENST00000496375 ZXDAP98168 799 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
CXCL12-208ENST00000496375 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms