RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 U2AF2P26368 475 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS52-221ENST00000495755 PBX3P40426 434 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TECP42680 631 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 NRIP1P48552 1158 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TRAPPC10P48553 1259 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 RARRES1P49788 294 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 RAB27AP51159 221 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 PTENP60484 403 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 POU5F1BQ06416 359 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 MXD4Q14582 209 aaPredicted RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 RABEP1Q15276 862 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 ZNF174Q15697 407 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TWF2Q6IBS0 349 aaKnown RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 PDE12Q6L8Q7 609 aaKnown RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 IFNLR1Q8IU57 520 aaPredicted RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 THNSL1Q8IYQ7 743 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 GJD3Q8N144 294 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 SLC39A11Q8N1S5 342 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 C4orf32Q8N8J7 132 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 FAM184AQ8NB25 1140 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 RNF149Q8NC42 400 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 ASAP3Q8TDY4 903 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 MICAL1Q8TDZ2 1067 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 RSPH1Q8WYR4 309 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 MRPS27Q92552 414 aaKnown RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 KHSRPQ92945 711 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS52-221ENST00000495755 LPPQ93052 612 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 PPP2R3CQ969Q6 453 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 MSLNLQ96KJ4 702 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 ZNF558Q96NG5 402 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 MTRQ99707 1265 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 POLR3CQ9BUI4 534 aaPredicted RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 MRPL9Q9BYD2 267 aaKnown RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 EPHX3Q9H6B9 360 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TLE6Q9H808 572 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 TUFT1Q9NNX1 390 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 FAM105AQ9NUU6 356 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 SPG21Q9NZD8 308 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 CLEC1BQ9P126 229 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 PUF60Q9UHX1 559 aaKnown RBP8.04□□□□□ -1.12
VPS52-221ENST00000495755 PCDHB2Q9Y5E7 798 aa8.04□□□□□ -1.12
VPS52-221ENST00000495755 PLXNA4Q9HCM2 1894 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 C19orf67A6NJJ6 358 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 MEIS3P2A8K0S8 358 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 PER2O15055 1255 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 MBTPS2O43462 519 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 TSPAN1O60635 241 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 MED24O75448 989 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 EYA4O95677 639 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 GLP2RO95838 553 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 OR52Z1P0C646 297 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 PPM1AP35813 382 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 TOB1P50616 345 aaPredicted RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 BCAR1P56945 870 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 KRT17Q04695 432 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 ZP2Q05996 745 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 CAPSQ13938 189 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 PCBP1Q15365 356 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS52-221ENST00000495755 SMAD2Q15796 467 aaKnown RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 CLUL1Q15846 466 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 AMHR2Q16671 573 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 DUSP6Q16828 381 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 LONRF3Q496Y0 759 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 NOMO2Q5JPE7 1267 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 TTC38Q5R3I4 469 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 GLB1LQ6UWU2 654 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 AGMOQ6ZNB7 445 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 RBM23Q86U06 439 aaKnown RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 PIGOQ8TEQ8 1089 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 PGBD4Q96DM1 585 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 NACC1Q96RE7 527 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 CDCA3Q99618 268 aaPredicted RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 NFKBIZQ9BYH8 718 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 NGRNQ9NPE2 291 aaKnown RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 CD207Q9UJ71 328 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 DBR1Q9UK59 544 aaKnown RBP8.03□□□□□ -1.12
VPS52-221ENST00000495755 FAM50BQ9Y247 325 aa8.03□□□□□ -1.12
VPS52-221ENST00000495755 HIDE1A8MVS5 230 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 PI4K2BG5E9Z4 385 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 ST18O60284 1047 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 CD2BP2O95400 341 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 GALTP07902 379 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 NCLP19338 710 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 MUTP22033 750 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 GLRA2P23416 452 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 RPA1P27694 616 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 AXLP30530 894 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 ALDH7A1P49419 539 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 NDUFV1P49821 464 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 FXR2P51116 673 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS52-221ENST00000495755 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 MBTD1Q05BQ5 628 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 COASYQ13057 564 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 SMAD4Q13485 552 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 KCNC3Q14003 757 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms