RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 TTC26A0AVF1 554 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 SOWAHDA6NJG2 315 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 PHF20L1A8MW92 1017 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 EIF3CLB5ME19 914 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 E9PMD0 336 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 MED24O75448 989 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 PSMD10O75832 226 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 URI1O94763 535 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 NDUFA10O95299 355 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 EPB41P11171 864 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 JAK3P52333 1124 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 RRP1BQ14684 758 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 NBPF9Q3BBW0 867 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 ZCWPW2Q504Y3 356 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 IER5Q5VY09 327 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 TRIM65Q6PJ69 517 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 HS2ST1Q7LGA3 356 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 NLRX1Q86UT6 975 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 CCDC42Q96M95 316 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 CCDC43Q96MW1 224 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 EIF3CQ99613 913 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 TTYH3Q9C0H2 523 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 DEF6Q9H4E7 631 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 PARVGQ9HBI0 331 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 NEUROD4Q9HD90 331 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 CEP72Q9P209 647 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 CNOT7Q9UIV1 285 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 HCN2Q9UL51 889 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 PPP1R9AQ9ULJ8 1098 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 MYO6Q9UM54 1294 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 PLAGL2Q9UPG8 496 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 BCS1LQ9Y276 419 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 BZW2Q9Y6E2 419 aaKnown RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 EPN1Q9Y6I3 576 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-213ENST00000495693 DOCK1Q14185 1865 aa9.46□□□□□ -0.9
EPHA4-213ENST00000495693 SHTN1A0MZ66 631 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ANO9A1A5B4 782 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 GTPBP10A4D1E9 387 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 NFKBIEO00221 500 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 IPO5O00410 1097 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 OPLAHO14841 1288 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 FLOT1O75955 427 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ZBTB7AO95365 584 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 LYPLA2O95372 231 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 CELA2BP08218 269 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 CCDC172P0C7W6 258 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 SPATA31C1P0DKV0 1188 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 MCM3P25205 808 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 HOXA13P31271 388 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 BACE1P56817 501 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 CKAP4Q07065 602 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ADAM9Q13443 819 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 GIT2Q14161 759 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 WHAMMP3Q1A5X7 153 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 MIIPQ5JXC2 388 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 NOL9Q5SY16 702 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 LYPD4Q6UWN0 246 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 TOGARAM2Q6ZUX3 1019 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 KCNK18Q7Z418 384 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 KIAA1328Q86T90 577 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 GPC2Q8N158 579 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF280CQ8ND82 737 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 LRRC15Q8TF66 581 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 COL26A1Q96A83 441 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ACDQ96AP0 544 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 MYO19Q96H55 970 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 NAPGQ99747 312 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 HSD17B14Q9BPX1 270 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ZHX3Q9H4I2 956 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 TMEM206Q9H813 350 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 MRPL44Q9H9J2 332 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 TMOD4Q9NZQ9 345 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 LARSQ9P2J5 1176 aaKnown RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 HACL1Q9UJ83 578 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ZNF112Q9UJU3 913 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 GDF2Q9UK05 429 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-213ENST00000495693 FBXL5Q9UKA1 691 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 PCDHA2Q9Y5H9 948 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 ATP8B3O60423 1300 aa9.45□□□□□ -0.9
EPHA4-213ENST00000495693 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ARHGEF35A5YM69 484 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 C2CD2LO14523 706 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 ATP2A1O14983 1001 aa9.44□□□□□ -0.9
EPHA4-213ENST00000495693 KHNYNO15037 678 aaKnown RBP9.44□□□□□ -0.9
EPHA4-213ENST00000495693 LGR5O75473 907 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms