RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 GCNT3O95395 438 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 C22orf31O95567 290 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 FGBP02675 491 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 ACTN1P12814 892 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 NAMPTP43490 491 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 ZNF131P52739 623 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 EFNA5P52803 228 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 EPHB4P54760 987 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 ZNF445P59923 1031 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
ACTN4-207ENST00000495553 NCBP1Q09161 790 aaKnown RBP10.45□□□□□ -0.74
ACTN4-207ENST00000495553 STRN3Q13033 797 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 MORC3Q14149 939 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 HSP90AA2PQ14568 343 aaPredicted RBP10.45□□□□□ -0.74
ACTN4-207ENST00000495553 SFR1Q86XK3 245 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 MYOCDQ8IZQ8 938 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 SPIRE2Q8WWL2 714 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 ERCC4Q92889 916 aaPredicted RBP10.45□□□□□ -0.74
ACTN4-207ENST00000495553 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 HVCN1Q96D96 273 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 TSG101Q99816 390 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 MTIF3Q9H2K0 278 aaKnown RBP10.45□□□□□ -0.74
ACTN4-207ENST00000495553 PRO3102Q9H379 93 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 EXOC7Q9UPT5 735 aa10.45□□□□□ -0.74
ACTN4-207ENST00000495553 LAMA2P24043 3122 aaKnown RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 IGKV6-21A0A0C4DH24 114 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 SMTNL1A8MU46 457 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 BECN2A8MW95 431 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 KLRC4O43908 158 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 FGFR1OPO95684 399 aaKnown RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 PHKA2P46019 1235 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 CLCN3P51790 818 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 PEX3P56589 373 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 MRPS6P82932 125 aaKnown RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 TMEM62Q0P6H9 643 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 SHHQ15465 462 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 TMEM240Q5SV17 173 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 ISM2Q6H9L7 571 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 ZNF365Q70YC5 407 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 RHPN2Q8IUC4 686 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 KIAA0319LQ8IZA0 1049 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 SYCP3Q8IZU3 236 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 LRRC71Q8N4P6 559 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 GOLGA5Q8TBA6 731 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 PRPF31Q8WWY3 499 aaKnown RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 DHTKD1Q96HY7 919 aaPredicted RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 RNPC3Q96LT9 517 aaKnown RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.44□□□□□ -0.742e-16■■□□□ 11.9
ACTN4-207ENST00000495553 INO80BQ9C086 356 aaPredicted RBP10.44□□□□□ -0.74
ACTN4-207ENST00000495553 TMEM206Q9H813 350 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 SLC39A2Q9NP94 309 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 TBC1D7Q9P0N9 293 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 GINS2Q9Y248 185 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 CDY2AQ9Y6F7 541 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 LAMA3Q16787 3333 aa10.44□□□□□ -0.74
ACTN4-207ENST00000495553 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ARID2Q68CP9 1835 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 SFI1A8K8P3 1242 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 GOLGA6L19H0YKK7 550 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 NBNO60934 754 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 CHRNA1P02708 482 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 SRGAP2CP0DJJ0 459 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ERCC5P28715 1186 aaPredicted RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ARL2P36404 184 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 NPTX2P47972 431 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 POU5F1BQ06416 359 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 LAMTOR4Q0VGL1 99 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 PAK1Q13153 545 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ANO6Q4KMQ2 910 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 COBLL1Q53SF7 1204 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 FAM26DQ5JW98 314 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 C9orf50Q5SZB4 431 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 C16orf59Q7L2K0 433 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 HS2ST1Q7LGA3 356 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 APBB1IPQ7Z5R6 666 aaPredicted RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ZNF410Q86VK4 478 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 GUF1Q8N442 669 aaKnown RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 SEPT8Q92599 483 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 BICD1Q96G01 975 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 NLRP4Q96MN2 994 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ACCSQ96QU6 501 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 NTPCRQ9BSD7 190 aaKnown RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 CELF4Q9BZC1 486 aaKnown RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 GCOM2Q9BZD3 368 aaPredicted RBP10.43□□□□□ -0.74
ACTN4-207ENST00000495553 ST6GALNAC4Q9H4F1 302 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 GPRC5CQ9NQ84 441 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 XPNPEP1Q9NQW7 623 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 TRPV2Q9Y5S1 764 aa10.43□□□□□ -0.74
ACTN4-207ENST00000495553 K7ERI5 159 aa10.42□□□□□ -0.74
ACTN4-207ENST00000495553 SLC16A4O15374 487 aa10.42□□□□□ -0.74
ACTN4-207ENST00000495553 CALUO43852 315 aaPredicted RBP10.42□□□□□ -0.74
ACTN4-207ENST00000495553 CXCL10P02778 98 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms