RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 ZNF280AP59817 542 aaPredicted RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 GTF2BQ00403 316 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 DGKZQ13574 1117 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 NT5DC3Q86UY8 548 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 KLHL7Q8IXQ5 586 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 FAM76AQ8TAV0 307 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 CASKIN2Q8WXE0 1202 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 CTNNBL1Q8WYA6 563 aaPredicted RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 GOLGA6AQ9NYA3 693 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 CWC15Q9P013 229 aaKnown RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 ASTN2O75129 1339 aaPredicted RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 TISP43B9A030 160 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 MAPK13O15264 365 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 PSMC5P62195 406 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 DLG4P78352 724 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 PTPROQ16827 1216 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 HAUS6Q7Z4H7 955 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 SLC17A8Q8NDX2 589 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 HES6Q96HZ4 224 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 IWS1Q96ST2 819 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 RMDN3Q96TC7 470 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 CBWD1Q9BRT8 395 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
CALD1-222ENST00000495522 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
CALD1-222ENST00000495522 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 BACH1O14867 736 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 FDX1P10109 184 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 SFNP31947 248 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 KRT76Q01546 638 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 PPFIA1Q13136 1202 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 MTMR2Q13614 643 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 UGCGQ16739 394 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 RASGEF1CQ8N431 466 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 MREGQ8N565 214 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.63■□□□□ 0.252e-6■■□□□ 12.4
CALD1-222ENST00000495522 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 PDCD2LQ9BRP1 358 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 PLEKHA4Q9H4M7 779 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 RPAP3Q9H6T3 665 aaPredicted RBP16.63■□□□□ 0.25
CALD1-222ENST00000495522 PXMP2Q9NR77 195 aa16.63■□□□□ 0.25
CALD1-222ENST00000495522 CCDC188H7C350 402 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 FOXN3O00409 490 aaPredicted RBP16.62■□□□□ 0.25
CALD1-222ENST00000495522 IVLP07476 585 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 EPC2Q52LR7 807 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 EIF1ADQ8N9N8 165 aaKnown RBP16.62■□□□□ 0.25
CALD1-222ENST00000495522 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
CALD1-222ENST00000495522 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 SEPT11Q9NVA2 429 aaKnown RBP16.62■□□□□ 0.25
CALD1-222ENST00000495522 BUB1BO60566 1050 aaPredicted RBP16.62■□□□□ 0.25
CALD1-222ENST00000495522 LRRN2O75325 713 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 EGFRP00533 1210 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 FAM153BP0C7A2 387 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 PPP3CAQ08209 521 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 ARHGEF16Q5VV41 709 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 AGPAT1Q99943 283 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 FAM153AQ9UHL3 310 aa16.62■□□□□ 0.25
CALD1-222ENST00000495522 TMEM150BA6NC51 233 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ANKRD62A6NC57 917 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 SLC16A4O15374 487 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ATP9AO75110 1047 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ABCB4P21439 1286 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
CALD1-222ENST00000495522 GCLMP48507 274 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 PEX3P56589 373 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 NSMFQ6X4W1 530 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
CALD1-222ENST00000495522 SH2D3AQ9BRG2 576 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
CALD1-222ENST00000495522 TESPA1A2RU30 521 aaPredicted RBP16.61■□□□□ 0.25
CALD1-222ENST00000495522 KRIT1O00522 736 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 PMM2O15305 246 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 CCNE2O96020 404 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 IRX3P78415 501 aaPredicted RBP16.61■□□□□ 0.25
CALD1-222ENST00000495522 PPATQ06203 517 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 CUL1Q13616 776 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 CFAP58Q5T655 872 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 FAM102BQ5T8I3 360 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ARHGEF19Q8IW93 802 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 RDM1Q8NG50 284 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 ZIM3Q96PE6 472 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 AP1M1Q9BXS5 423 aa16.61■□□□□ 0.25
CALD1-222ENST00000495522 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms