RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
VPS50-219ENST00000495039 C16orf92Q96LL3 132 aa6.1□□□□□ -1.43
VPS50-219ENST00000495039 BBC3Q96PG8 261 aaPredicted RBP6.1□□□□□ -1.43
VPS50-219ENST00000495039 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
VPS50-219ENST00000495039 NRP1O14786 923 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 STC2O76061 302 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 CD38P28907 300 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 RASA3Q14644 834 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 EPHA7Q15375 998 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 MAN2A1Q16706 1144 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 ZKSCAN2Q63HK3 967 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 OLFML1Q6UWY5 402 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 CXorf67Q86X51 503 aaPredicted RBP6.09□□□□□ -1.43
VPS50-219ENST00000495039 CHST14Q8NCH0 376 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 BEND2Q8NDZ0 799 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 DEPDC7Q96QD5 511 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
VPS50-219ENST00000495039 EIF2B4Q9UI10 523 aaKnown RBP6.09□□□□□ -1.43
VPS50-219ENST00000495039 COL4A3Q01955 1670 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 B4E1Z4 1266 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 H7C1D1 291 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 M0R2C6 588 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 MYBPC3Q14896 1274 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 METTL24Q5JXM2 366 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 UIMC1Q96RL1 719 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 SLC46A2Q9BY10 475 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 OSBPL6Q9BZF3 934 aa6.08□□□□□ -1.44
VPS50-219ENST00000495039 PITHD1Q9GZP4 211 aaPredicted RBP6.08□□□□□ -1.44
VPS50-219ENST00000495039 FSBPO95073 299 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 ZFP36P26651 326 aaKnown RBP6.07□□□□□ -1.44
VPS50-219ENST00000495039 ADCY2Q08462 1091 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 ZNF174Q15697 407 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 FAM214AQ32MH5 1076 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 IQSEC1Q6DN90 963 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 ZCCHC8Q6NZY4 707 aaKnown RBP6.07□□□□□ -1.44
VPS50-219ENST00000495039 Q6YL49 198 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 KIAA1958Q8N8K9 716 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 GLB1L3Q8NCI6 653 aaPredicted RBP6.07□□□□□ -1.44
VPS50-219ENST00000495039 MYEOVQ96EZ4 313 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 CPPED1Q9BRF8 314 aaPredicted RBP6.07□□□□□ -1.44
VPS50-219ENST00000495039 PDCD2LQ9BRP1 358 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 KCNH6Q9H252 994 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 EPC1Q9H2F5 836 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 SYNPO2LQ9H987 977 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 SAMD15Q9P1V8 674 aa6.07□□□□□ -1.44
VPS50-219ENST00000495039 A0A0A6YYJ9 748 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 A0A0A6YYK5 440 aaPredicted RBP6.06□□□□□ -1.44
VPS50-219ENST00000495039 CENPVL1A0A0U1RR11 272 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 KIAA0355O15063 1070 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 HOXA3O43365 443 aaPredicted RBP6.06□□□□□ -1.44
VPS50-219ENST00000495039 GLRX3O76003 335 aaKnown RBP6.06□□□□□ -1.44
VPS50-219ENST00000495039 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 USP14P54578 494 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 ADCY1Q08828 1119 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 SUPT20HQ8NEM7 779 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 MTG2Q9H4K7 406 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 ZNF768Q9H5H4 540 aaKnown RBP6.06□□□□□ -1.44
VPS50-219ENST00000495039 CABP5Q9NP86 173 aa6.06□□□□□ -1.44
VPS50-219ENST00000495039 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
VPS50-219ENST00000495039 PTPDC1A2A3K4 754 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 FAM221BA6H8Z2 402 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 PTX3P26022 381 aaPredicted RBP6.05□□□□□ -1.44
VPS50-219ENST00000495039 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
VPS50-219ENST00000495039 SERINC3Q13530 473 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 VPS72Q15906 364 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 TIGD7Q6NT04 549 aaPredicted RBP6.05□□□□□ -1.44
VPS50-219ENST00000495039 KANSL1Q7Z3B3 1105 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 FAM83AQ86UY5 434 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 PHYKPLQ8IUZ5 450 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 C7orf31Q8N865 590 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 HIRIP3Q9BW71 556 aaPredicted RBP6.05□□□□□ -1.44
VPS50-219ENST00000495039 NCOA5Q9HCD5 579 aaKnown RBP6.05□□□□□ -1.44
VPS50-219ENST00000495039 SNTG2Q9NY99 539 aa6.05□□□□□ -1.44
VPS50-219ENST00000495039 AHRRA9YTQ3 701 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 OPHN1O60890 802 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 DNAJC6O75061 913 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 IGFALSP35858 605 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 ZEB1P37275 1124 aaPredicted RBP6.04□□□□□ -1.44
VPS50-219ENST00000495039 AVPR1BP47901 424 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 COLEC12Q5KU26 742 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 OR52N2Q8NGI0 321 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 DNAJC7Q99615 494 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
VPS50-219ENST00000495039 NDC1Q9BTX1 674 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 ENKD1Q9H0I2 346 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 SERHL2Q9H4I8 314 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 ING3Q9NXR8 418 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS50-219ENST00000495039 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
VPS50-219ENST00000495039 LPXNO60711 386 aa6.03□□□□□ -1.44
VPS50-219ENST00000495039 APOL3O95236 402 aa6.03□□□□□ -1.44
VPS50-219ENST00000495039 GAAP10253 952 aa6.03□□□□□ -1.44
VPS50-219ENST00000495039 ZNF37AP17032 561 aaPredicted RBP6.03□□□□□ -1.44
VPS50-219ENST00000495039 WNT3AP56704 352 aa6.03□□□□□ -1.44
VPS50-219ENST00000495039 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms