RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TERF2Q15554 542 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 ZNF808Q8N4W9 903 aaPredicted RBP6.02□□□□□ -1.45
SMC4-224ENST00000494612 NAF1Q96HR8 494 aaKnown RBP6.02□□□□□ -1.45
SMC4-224ENST00000494612 AMNQ9BXJ7 453 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 KIAA1683Q9H0B3 1180 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 ZMAT4Q9H898 229 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 C14orf119Q9NWQ9 140 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 KLHL42Q9P2K6 505 aa6.02□□□□□ -1.45
SMC4-224ENST00000494612 GOLGA8AA7E2F4 631 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 GOLGA8BA8MQT2 603 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 MT-CO1P00395 513 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 HMGCRP04035 888 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 CYP17A1P05093 508 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 HERVK_113P62684 666 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 ABCB5Q2M3G0 1257 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 FNDC7Q5VTL7 733 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 DPY19L2P1Q6NXN4 242 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 USP30Q70CQ3 517 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 RAVER1Q8IY67 606 aaKnown RBP6.01□□□□□ -1.45
SMC4-224ENST00000494612 GPR135Q8IZ08 494 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 TGFBRAP1Q8WUH2 860 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 AHCYL2Q96HN2 611 aaKnown RBP6.01□□□□□ -1.45
SMC4-224ENST00000494612 TUBGCP5Q96RT8 1024 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 BTBD2Q9BX70 525 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 ANO3Q9BYT9 981 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 C12orf65Q9H3J6 166 aaKnown RBP6.01□□□□□ -1.45
SMC4-224ENST00000494612 ZNF703Q9H7S9 590 aaPredicted RBP6.01□□□□□ -1.45
SMC4-224ENST00000494612 PLA2G3Q9NZ20 509 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 PUF60Q9UHX1 559 aaKnown RBP6.01□□□□□ -1.45
SMC4-224ENST00000494612 MSRAQ9UJ68 235 aa6.01□□□□□ -1.45
SMC4-224ENST00000494612 S100BP04271 92 aaPredicted RBP6□□□□□ -1.45
SMC4-224ENST00000494612 CLEC2LP0C7M8 214 aa6□□□□□ -1.45
SMC4-224ENST00000494612 ADCY8P40145 1251 aa6□□□□□ -1.45
SMC4-224ENST00000494612 SESN3P58005 492 aa6□□□□□ -1.45
SMC4-224ENST00000494612 EXOSC10Q01780 885 aaKnown RBP6□□□□□ -1.45
SMC4-224ENST00000494612 HGFACQ04756 655 aa6□□□□□ -1.45
SMC4-224ENST00000494612 PCOLCEQ15113 449 aa6□□□□□ -1.45
SMC4-224ENST00000494612 PDCD1Q15116 288 aa6□□□□□ -1.45
SMC4-224ENST00000494612 KANK2Q63ZY3 851 aa6□□□□□ -1.45
SMC4-224ENST00000494612 LRSAM1Q6UWE0 723 aa6□□□□□ -1.45
SMC4-224ENST00000494612 NECAB2Q7Z6G3 386 aa6□□□□□ -1.45
SMC4-224ENST00000494612 ZNF496Q96IT1 587 aaPredicted RBP6□□□□□ -1.45
SMC4-224ENST00000494612 C16orf92Q96LL3 132 aa6□□□□□ -1.45
SMC4-224ENST00000494612 PLEKHG4BQ96PX9 1271 aa6□□□□□ -1.45
SMC4-224ENST00000494612 ASPSCR1Q9BZE9 553 aa6□□□□□ -1.45
SMC4-224ENST00000494612 PUS7LQ9H0K6 701 aaKnown RBP6□□□□□ -1.45
SMC4-224ENST00000494612 POFUT1Q9H488 388 aa6□□□□□ -1.45
SMC4-224ENST00000494612 CDC42EP3Q9UKI2 254 aa6□□□□□ -1.45
SMC4-224ENST00000494612 PCSK5Q92824 1860 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 GOLGA6L22H0YM25 854 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 KDM1AO60341 852 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 MYBL2P10244 700 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 CD40P25942 277 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 SDHAP31040 664 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 MSX2P35548 267 aaPredicted RBP5.99□□□□□ -1.45
SMC4-224ENST00000494612 IARSP41252 1262 aaKnown RBP5.99□□□□□ -1.45
SMC4-224ENST00000494612 ECE1P42892 770 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 ATXN1P54253 815 aaKnown RBP5.99□□□□□ -1.45
SMC4-224ENST00000494612 CD83Q01151 205 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 SLC6A3Q01959 620 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 CT83Q5H943 113 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 ODR4Q5SWX8 454 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 TMEM200BQ69YZ2 307 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 RASSF3Q86WH2 238 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 ZNF610Q8N9Z0 462 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 FOXRED1Q96CU9 486 aaPredicted RBP5.99□□□□□ -1.45
SMC4-224ENST00000494612 OR10A2Q9H208 303 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 NELFAQ9H3P2 528 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 HECAQ9UBI9 543 aaPredicted RBP5.99□□□□□ -1.45
SMC4-224ENST00000494612 EDARQ9UNE0 448 aa5.99□□□□□ -1.45
SMC4-224ENST00000494612 A0A0G2JNJ9 132 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 UBA6A0AVT1 1052 aaPredicted RBP5.98□□□□□ -1.45
SMC4-224ENST00000494612 PMS2P1A4D2B8 440 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 GABRDO14764 452 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 ALDH1L1O75891 902 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 HIBADHP31937 336 aaKnown RBP5.98□□□□□ -1.45
SMC4-224ENST00000494612 RGS3P49796 1198 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 MRE11P49959 708 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 SYDE2Q5VT97 1194 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 PRAMEF9Q5VWM5 478 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 PGM2L1Q6PCE3 622 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 FRMD7Q6ZUT3 714 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 JDP2Q8WYK2 163 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 MYL10Q9BUA6 226 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 AGO3Q9H9G7 860 aaKnown RBP5.98□□□□□ -1.45
SMC4-224ENST00000494612 TLR9Q9NR96 1032 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 TYW1Q9NV66 732 aaKnown RBP5.98□□□□□ -1.45
SMC4-224ENST00000494612 Q9UFV3 132 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 TNKSO95271 1327 aa5.98□□□□□ -1.45
SMC4-224ENST00000494612 H2AFYO75367 372 aaKnown RBP5.97□□□□□ -1.45
SMC4-224ENST00000494612 ADH4P08319 380 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 FNTBP49356 437 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 GRM7Q14831 915 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 EPHA7Q15375 998 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 CLUL1Q15846 466 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 PTPN21Q16825 1174 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 UNQ6494/PRO21346Q6UXR6 183 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 ADGRE4PQ86SQ3 457 aa5.97□□□□□ -1.45
SMC4-224ENST00000494612 RTN4RL1Q86UN2 441 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms