RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 DNM3Q9UQ16 869 aa24.3■■□□□ 1.48
HPS3-207ENST00000494327 ATF7P17544 494 aaPredicted RBP24.29■■□□□ 1.48
HPS3-207ENST00000494327 POU5F1BQ06416 359 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 NCBP1Q09161 790 aaKnown RBP24.29■■□□□ 1.48
HPS3-207ENST00000494327 CLLU1OSQ5K130 101 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 ARL6IP4Q66PJ3 421 aaKnown RBP24.29■■□□□ 1.48
HPS3-207ENST00000494327 KLHL23Q8NBE8 558 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 PLIN2Q99541 437 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 AAASQ9NRG9 546 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 PLAGL2Q9UPG8 496 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 PCDHB12Q9Y5F1 795 aa24.29■■□□□ 1.48
HPS3-207ENST00000494327 HOXA11P31270 313 aaPredicted RBP24.28■■□□□ 1.48
HPS3-207ENST00000494327 MBTD1Q05BQ5 628 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 SF3A1Q15459 793 aaKnown RBP24.28■■□□□ 1.48
HPS3-207ENST00000494327 LRRC55Q6ZSA7 311 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 IFNLR1Q8IU57 520 aaPredicted RBP24.28■■□□□ 1.48
HPS3-207ENST00000494327 P2RX5Q93086 422 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 CPB2Q96IY4 423 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 TRAIPQ9BWF2 469 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 CWH43Q9H720 699 aa24.28■■□□□ 1.48
HPS3-207ENST00000494327 PRRC2BQ5JSZ5 2229 aaKnown RBP24.27■■□□□ 1.48
HPS3-207ENST00000494327 TSPAN1O60635 241 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 EYA4O95677 639 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 ITGB1P05556 798 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 HSP90AA1P07900 732 aaKnown RBP24.27■■□□□ 1.48
HPS3-207ENST00000494327 RAB27AP51159 221 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 PCDHB2Q9Y5E7 798 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 NLRC5Q86WI3 1866 aa24.27■■□□□ 1.48
HPS3-207ENST00000494327 BMP15O95972 392 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 RESTQ13127 1097 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 TIGD5Q53EQ6 642 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 NAALADL2Q58DX5 795 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 FAM173BQ6P4H8 233 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 KCNK18Q7Z418 384 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 ZBTB8OSQ8IWT0 167 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 THNSL1Q8IYQ7 743 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 LRRC43Q8N309 656 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 COLGALT1Q8NBJ5 622 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 SPPL3Q8TCT6 385 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 BSNDQ8WZ55 320 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 PGBD4Q96DM1 585 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 CDK5RAP3Q96JB5 506 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 LMAN2LQ9H0V9 348 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 MTMR6Q9Y217 621 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 INPP5FQ9Y2H2 1132 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 CLIC4Q9Y696 253 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 RALGAPA2Q2PPJ7 1873 aa24.26■■□□□ 1.47
HPS3-207ENST00000494327 MEIS3P2A8K0S8 358 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 STX6O43752 255 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 ZNF623O75123 536 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 LAG3P18627 525 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 LIG1P18858 919 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 AXLP30530 894 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 TFF2Q03403 129 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 PCBP1Q15365 356 aaKnown RBP eCLIP24.25■■□□□ 1.47
HPS3-207ENST00000494327 TCEAL5Q5H9L2 206 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 UBXN11Q5T124 520 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 NOTUMQ6P988 496 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 DEPTORQ8TB45 409 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 ATXN2LQ8WWM7 1075 aaKnown RBP24.25■■□□□ 1.47
HPS3-207ENST00000494327 HLA-CQ95604 372 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 PNMA5Q96PV4 448 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 NFKBIZQ9BYH8 718 aa24.25■■□□□ 1.47
HPS3-207ENST00000494327 NSUN3Q9H649 340 aaKnown RBP24.25■■□□□ 1.47
HPS3-207ENST00000494327 TRANK1O15050 2925 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 B4GALT5O43286 388 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 SSBP05455 408 aaKnown RBP eCLIP24.24■■□□□ 1.47
HPS3-207ENST00000494327 DNAJB1P25685 340 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 MRPS5P82675 430 aaKnown RBP24.24■■□□□ 1.47
HPS3-207ENST00000494327 CEBPZQ03701 1054 aaKnown RBP24.24■■□□□ 1.47
HPS3-207ENST00000494327 AMHR2Q16671 573 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 GLB1LQ6UWU2 654 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 CABP7Q86V35 215 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 POF1BQ8WVV4 589 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 IFT74Q96LB3 600 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 EIF2AQ9BY44 585 aaKnown RBP24.24■■□□□ 1.47
HPS3-207ENST00000494327 PRUNE2Q8WUY3 3088 aa24.24■■□□□ 1.47
HPS3-207ENST00000494327 FNDC1Q4ZHG4 1894 aaPredicted RBP24.24■■□□□ 1.47
HPS3-207ENST00000494327 ARF4P18085 180 aaPredicted RBP24.23■■□□□ 1.47
HPS3-207ENST00000494327 PBX3P40426 434 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 PPP2R5AQ15172 486 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 CDR2LQ86X02 465 aaPredicted RBP24.23■■□□□ 1.47
HPS3-207ENST00000494327 SPRYD3Q8NCJ5 442 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 KIFAP3Q92845 792 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 ASB2Q96Q27 587 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 RUSC1Q9BVN2 902 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 MRPL9Q9BYD2 267 aaKnown RBP24.23■■□□□ 1.47
HPS3-207ENST00000494327 NT5C3AQ9H0P0 336 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 COG5Q9UP83 839 aa24.23■■□□□ 1.47
HPS3-207ENST00000494327 DLL1O00548 723 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 OFD1O75665 1012 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 FGF18O76093 207 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 UBA7P41226 1012 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 NAMPTP43490 491 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 GRIN1Q05586 938 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 CAMK1Q14012 370 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 TMEM132AQ24JP5 1023 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 NOMO2Q5JPE7 1267 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 HYIQ5T013 277 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 CDCA2Q69YH5 1023 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms