RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MBTD1Q05BQ5 628 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 CLLU1OSQ5K130 101 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 ABI1Q8IZP0 508 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 LRRC43Q8N309 656 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 BHMT2Q9H2M3 363 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 GPRC5CQ9NQ84 441 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 FAM105AQ9NUU6 356 aa25.11■■□□□ 1.61
SNIP1-203ENST00000493916 ERLIN2O94905 339 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 AXLP30530 894 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 HOXA11P31270 313 aaPredicted RBP25.1■■□□□ 1.61
SNIP1-203ENST00000493916 SKIV2LQ15477 1246 aaKnown RBP25.1■■□□□ 1.61
SNIP1-203ENST00000493916 RNF169Q8NCN4 708 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 ATXN2LQ8WWM7 1075 aaKnown RBP25.1■■□□□ 1.61
SNIP1-203ENST00000493916 CWH43Q9H720 699 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 AAASQ9NRG9 546 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 TYW1Q9NV66 732 aaKnown RBP25.1■■□□□ 1.61
SNIP1-203ENST00000493916 PLAGL2Q9UPG8 496 aa25.1■■□□□ 1.61
SNIP1-203ENST00000493916 SPTBN5Q9NRC6 3674 aaKnown RBP25.09■■□□□ 1.61
SNIP1-203ENST00000493916 VWA3AA6NCI4 1184 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 GRM6O15303 877 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 TSPAN1O60635 241 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 CDC25AP30304 524 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 HYIQ5T013 277 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 CDCA2Q69YH5 1023 aaPredicted RBP25.09■■□□□ 1.61
SNIP1-203ENST00000493916 MAEAQ7L5Y9 396 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 CCDC51Q96ER9 411 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 DNM3Q9UQ16 869 aa25.09■■□□□ 1.61
SNIP1-203ENST00000493916 INO80B-WBP1J3KQ70 363 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 EYA4O95677 639 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 LAG3P18627 525 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 RESTQ13127 1097 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 AMHR2Q16671 573 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 CSPP1Q1MSJ5 1256 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 SPOUT1Q5T280 376 aaKnown RBP25.08■■□□□ 1.61
SNIP1-203ENST00000493916 LRRC55Q6ZSA7 311 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 KCTD17Q8N5Z5 321 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 KLHL23Q8NBE8 558 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 AK8Q96MA6 479 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 MRPL9Q9BYD2 267 aaKnown RBP25.08■■□□□ 1.61
SNIP1-203ENST00000493916 HCSTQ9UBK5 93 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 COG5Q9UP83 839 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 PCDHB2Q9Y5E7 798 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 PCDHB12Q9Y5F1 795 aa25.08■■□□□ 1.61
SNIP1-203ENST00000493916 ITGB1P05556 798 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 NCBP1Q09161 790 aaKnown RBP25.07■■□□□ 1.6
SNIP1-203ENST00000493916 UBXN11Q5T124 520 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 NOTUMQ6P988 496 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 HSCBQ8IWL3 235 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 COLGALT1Q8NBJ5 622 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 HELQQ8TDG4 1101 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 PGBD4Q96DM1 585 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 NSUN3Q9H649 340 aaKnown RBP25.07■■□□□ 1.6
SNIP1-203ENST00000493916 ALG13Q9NP73 1137 aaKnown RBP25.07■■□□□ 1.6
SNIP1-203ENST00000493916 FOXD4L1Q9NU39 408 aa25.07■■□□□ 1.6
SNIP1-203ENST00000493916 LRRIQ4A6NIV6 560 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 E9PMD0 336 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 SLC26A4O43511 780 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 SF3A1Q15459 793 aaKnown RBP25.06■■□□□ 1.6
SNIP1-203ENST00000493916 MRPL10Q7Z7H8 261 aaKnown RBP25.06■■□□□ 1.6
SNIP1-203ENST00000493916 SPPL3Q8TCT6 385 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 BSNDQ8WZ55 320 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 KIFAP3Q92845 792 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 NT5C3AQ9H0P0 336 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 MTMR6Q9Y217 621 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 ATG2AQ2TAZ0 1938 aa25.06■■□□□ 1.6
SNIP1-203ENST00000493916 NAMPTP43490 491 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 MRPS5P82675 430 aaKnown RBP25.05■■□□□ 1.6
SNIP1-203ENST00000493916 CAMK1Q14012 370 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 PPP2R5AQ15172 486 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 TJAP1Q5JTD0 557 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 GLB1LQ6UWU2 654 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 PPP4R3CPQ6ZMV5 832 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 KCNK18Q7Z418 384 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 ZBTB8OSQ8IWT0 167 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 LPPQ93052 612 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 HLA-CQ95604 372 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 PRIMPOLQ96LW4 560 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 PNMA5Q96PV4 448 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 ASB2Q96Q27 587 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 C2orf40Q9H1Z8 148 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 VCANP13611 3396 aa25.05■■□□□ 1.6
SNIP1-203ENST00000493916 STX6O43752 255 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 ARF4P18085 180 aaPredicted RBP25.04■■□□□ 1.6
SNIP1-203ENST00000493916 NCLP19338 710 aaKnown RBP25.04■■□□□ 1.6
SNIP1-203ENST00000493916 UBE3AQ05086 875 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 FAM187BQ17R55 369 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 CNNM3Q8NE01 707 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 CSRNP2Q9H175 543 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 PRMT7Q9NVM4 692 aaPredicted RBP25.04■■□□□ 1.6
SNIP1-203ENST00000493916 CNTNAP2Q9UHC6 1331 aa25.04■■□□□ 1.6
SNIP1-203ENST00000493916 MEIS3P2A8K0S8 358 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 DNAJB1P25685 340 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 LONP1P36776 959 aaKnown RBP25.03■■□□□ 1.6
SNIP1-203ENST00000493916 AAK1Q2M2I8 961 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 TMEM119Q4V9L6 283 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 TCEAL5Q5H9L2 206 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 AGMOQ6ZNB7 445 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 THNSL1Q8IYQ7 743 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 CPB2Q96IY4 423 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 IFT74Q96LB3 600 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms