RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 A0A1W2PQC6 194 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ACOT7O00154 380 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 APOL3O95236 402 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 NTRK1P04629 796 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 SRGNP10124 158 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 TNFSF4P23510 183 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 IL6STP40189 918 aaPredicted RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 RTP1P59025 263 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 BNIP3Q12983 259 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 PUM3Q15397 648 aaKnown RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 TUBB8Q3ZCM7 444 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 MUM1L1Q5H9M0 696 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 SLFN12LQ6IEE8 588 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 SWSAP1Q6NVH7 229 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 GALNT18Q6P9A2 607 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ZNF574Q6ZN55 896 aaPredicted RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 MIGA2Q7L4E1 593 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 TTC7BQ86TV6 843 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 NETO2Q8NC67 525 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 BCL7CQ8WUZ0 217 aaPredicted RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ASB11Q8WXH4 323 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 CLEC4DQ8WXI8 215 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 BRI3BPQ8WY22 251 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ERCC4Q92889 916 aaPredicted RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ARL8AQ96BM9 186 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 CDC5LQ99459 802 aaKnown RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 AP5M1Q9H0R1 490 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 PRDM12Q9H4Q4 367 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 CERS4Q9HA82 394 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 GPRC5BQ9NZH0 403 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 ACSL6Q9UKU0 697 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 TPCN1Q9ULQ1 816 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 LAS1LQ9Y4W2 734 aaKnown RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 OAS3Q9Y6K5 1087 aaKnown RBP5.38□□□□□ -1.55
GTF3A-208ENST00000493903 MYPNQ86TC9 1320 aa5.38□□□□□ -1.55
GTF3A-208ENST00000493903 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 AOAHP28039 575 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 CHKAP35790 457 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 CD96P40200 585 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 MCAMP43121 646 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 CDK17Q00537 523 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 SIM2Q14190 667 aaPredicted RBP5.37□□□□□ -1.55
GTF3A-208ENST00000493903 GJC2Q5T442 439 aaPredicted RBP5.37□□□□□ -1.55
GTF3A-208ENST00000493903 PRAMEF9Q5VWM5 478 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 CCDC174Q6PII3 467 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 APOA5Q6Q788 366 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 BTNL9Q6UXG8 535 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 WFDC3Q8IUB2 231 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 RBM12BQ8IXT5 1001 aaKnown RBP5.37□□□□□ -1.55
GTF3A-208ENST00000493903 FLCNQ8NFG4 579 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 RPGRQ92834 1020 aaKnown RBP5.37□□□□□ -1.55
GTF3A-208ENST00000493903 RGMAQ96B86 450 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 MPP4Q96JB8 637 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 COLEC11Q9BWP8 271 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 C22orf23Q9BZE7 217 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 MYLK2Q9H1R3 596 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 GREM2Q9H772 168 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 BTBD7Q9P203 1132 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 IMPACTQ9P2X3 320 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 SCOCQ9UIL1 159 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 NR2E3Q9Y5X4 410 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 TAF6LQ9Y6J9 622 aa5.37□□□□□ -1.55
GTF3A-208ENST00000493903 PRAMEF22A3QJZ6 481 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 LRRC10BA6NIK2 292 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 DDX3XO00571 662 aaKnown RBP eCLIP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PHGDHO43175 533 aaKnown RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 GLI4P10075 376 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FAHP16930 419 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 ABCB4P21439 1286 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 TECP42680 631 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 MAP2K6P52564 334 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 RAB1AP62820 205 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 DSC2Q02487 901 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 MVKQ03426 396 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 CHRNEQ04844 493 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 ICA1Q05084 483 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 ZNF543Q08ER8 600 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PPFIA1Q13136 1202 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 TBX2Q13207 712 aaPredicted RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FGL2Q14314 439 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 C3orf36Q3SXR2 165 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 FAM209BQ5JX69 171 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 DACT2Q5SW24 774 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 JAKMIP3Q5VZ66 844 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 LVRNQ6Q4G3 990 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 TP53INP2Q8IXH6 220 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 OXR1Q8N573 874 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 ANKS4BQ8N8V4 417 aa5.36□□□□□ -1.55
GTF3A-208ENST00000493903 PPHLN1Q8NEY8 458 aaKnown RBP5.36□□□□□ -1.55
GTF3A-208ENST00000493903 IL17REQ8NFR9 667 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms