RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 IFT122Q9HBG6 1241 aa26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 BMP2KQ9NSY1 1161 aaPredicted RBP26.46■■□□□ 1.83
RHBDD3-206ENST00000493894 BTBD18B2RXH4 712 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 DCXO43602 365 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 NEMFO60524 1076 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 SRGAP2BP0DMP2 458 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 XKR9Q5GH70 373 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 TCP11Q8WWU5 503 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 PRPF31Q8WWY3 499 aaKnown RBP26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 TMEM143Q96AN5 459 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 NGRNQ9NPE2 291 aaKnown RBP26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 AGPAT5Q9NUQ2 364 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 FAM105AQ9NUU6 356 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 PCDHA12Q9UN75 941 aa26.45■■□□□ 1.82
RHBDD3-206ENST00000493894 GLB1LQ6UWU2 654 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 SRGAP1Q7Z6B7 1085 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 TPH2Q8IWU9 490 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 SLC39A11Q8N1S5 342 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 MTRQ99707 1265 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 HCN4Q9Y3Q4 1203 aa26.44■■□□□ 1.82
RHBDD3-206ENST00000493894 SEC24BO95487 1268 aa26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 ALDH7A1P49419 539 aaKnown RBP26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 LAMTOR4Q0VGL1 99 aa26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 TMC7Q7Z402 723 aa26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 LPPQ93052 612 aa26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 EIF2AK1Q9BQI3 630 aaKnown RBP26.43■■□□□ 1.82
RHBDD3-206ENST00000493894 SRGAP2CP0DJJ0 459 aa26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 BCAR1P56945 870 aa26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 ST3GAL1Q11201 340 aa26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 LONRF3Q496Y0 759 aa26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 VN1R2Q8NFZ6 395 aa26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 CCDC43Q96MW1 224 aaKnown RBP26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 TTC12Q9H892 705 aaPredicted RBP26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 USP15Q9Y4E8 981 aaPredicted RBP26.42■■□□□ 1.82
RHBDD3-206ENST00000493894 CARNS1A5YM72 827 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 ASAP2O43150 1006 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 ZNF623O75123 536 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 ZC3H11AO75152 810 aaKnown RBP eCLIP26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 SLITRK3O94933 977 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 RBM10P98175 930 aaKnown RBP26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 SMC1AQ14683 1233 aaKnown RBP26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 FERMT3Q86UX7 667 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 RNF149Q8NC42 400 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 PGBD4Q96DM1 585 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 TMEM169Q96HH4 297 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 INPP5FQ9Y2H2 1132 aa26.41■■□□□ 1.82
RHBDD3-206ENST00000493894 HIDE1A8MVS5 230 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 PRR33A8MZF0 331 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 ZBTB39O15060 712 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 LYPLA2O95372 231 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 TXKP42681 527 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 SAFBQ15424 915 aaKnown RBP eCLIP26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 NOMO2Q5JPE7 1267 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 MINDY3Q9H8M7 445 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 TBC1D13Q9NVG8 400 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 LIMCH1Q9UPQ0 1083 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 PCDHB2Q9Y5E7 798 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 C5orf42Q9H799 3197 aa26.4■■□□□ 1.82
RHBDD3-206ENST00000493894 NT5C1B-RDH14C9J2C7 533 aa26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 WNT7AO00755 349 aa26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 CENPBP07199 599 aaPredicted RBP26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 RNASELQ05823 741 aaKnown RBP26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 MXD4Q14582 209 aaPredicted RBP26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 BMS1Q14692 1282 aaKnown RBP26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 TMEM184AQ6ZMB5 413 aa26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 HSD17B14Q9BPX1 270 aa26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 XPNPEP1Q9NQW7 623 aa26.39■■□□□ 1.82
RHBDD3-206ENST00000493894 MEIS3P2A8K0S8 358 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 ERLIN2O94905 339 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 CCDC83Q8IWF9 413 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 URGCPQ8TCY9 931 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 MTMR9Q96QG7 549 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 ANKEF1Q9NU02 776 aa26.38■■□□□ 1.81
RHBDD3-206ENST00000493894 OFD1O75665 1012 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 DGAT1O75907 488 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 CA8P35219 290 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 TECP42680 631 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 GUCY1B3Q02153 619 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 KCNC3Q14003 757 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 TFDP1Q14186 410 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 PCBP1Q15365 356 aaKnown RBP eCLIP26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 ANKRD54Q6NXT1 300 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 LLGL2Q6P1M3 1020 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 C8orf76Q96K31 380 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 LLPHQ9BRT6 129 aaKnown RBP26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 NRDE2Q9H7Z3 1164 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 CNTNAP2Q9UHC6 1331 aa26.37■■□□□ 1.81
RHBDD3-206ENST00000493894 POTEMA6NI47 508 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 ATP2B1P20020 1258 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 RNF135Q8IUD6 432 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 MRPL43Q8N983 215 aaKnown RBP26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 PHF7Q9BWX1 381 aaPredicted RBP26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 GBP3Q9H0R5 595 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 RSAD1Q9HA92 442 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 MUTYHQ9UIF7 546 aa26.36■■□□□ 1.81
RHBDD3-206ENST00000493894 C2orf71A6NGG8 1288 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 HOXA11P31270 313 aaPredicted RBP26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 MCM7P33993 719 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 PLA2G5P39877 138 aa26.35■■□□□ 1.81
RHBDD3-206ENST00000493894 PTENP60484 403 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms