RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PPP2R5AQ15172 486 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 SHHQ15465 462 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 CNKSR3Q6P9H4 555 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 USP38Q8NB14 1042 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 MAGEF1Q9HAY2 307 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 KMT5AQ9NQR1 393 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 LMBRD1Q9NUN5 540 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 TBC1D7Q9P0N9 293 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 SQORQ9Y6N5 450 aa19.75■□□□□ 0.75
PDLIM7-208ENST00000493815 PFKMP08237 780 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 ZNF131P52739 623 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 CDCA2Q69YH5 1023 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 CATSPER4Q7RTX7 472 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 SRGAP1Q7Z6B7 1085 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 SFR1Q86XK3 245 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 C7orf25Q9BPX7 421 aa19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 CXXC1Q9P0U4 656 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-208ENST00000493815 GPR182O15218 404 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 MGEA5O60502 916 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 POU5F1BQ06416 359 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 PSRC1Q6PGN9 363 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 HPS3Q969F9 1004 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 PANK4Q9NVE7 773 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 DACT1Q9NYF0 836 aa19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 LARSQ9P2J5 1176 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-208ENST00000493815 TTLL13PA6NNM8 815 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 ZBBXA8MT70 800 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 B4GALT5O43286 388 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 IBSPP21815 317 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 SFPQP23246 707 aaKnown RBP eCLIP19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 RTN4RL1Q86UN2 441 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 IFNLR1Q8IU57 520 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 ZBTB8OSQ8IWT0 167 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 NFKBIZQ9BYH8 718 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 LRRC27Q9C0I9 530 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 C17orf75Q9HAS0 396 aa19.72■□□□□ 0.75
PDLIM7-208ENST00000493815 TRAK2O60296 914 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 EDN1P05305 212 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 NMT1P30419 496 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 IKBKEQ14164 716 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 HERC4Q5GLZ8 1057 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 TMCO2Q7Z6W1 182 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 TMEM161BQ8NDZ6 487 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 SPIRE2Q8WWL2 714 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 LINC01599Q8WXQ3 324 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 ERCC4Q92889 916 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 CPB2Q96IY4 423 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 FIZ1Q96SL8 496 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 FGFBP2Q9BYJ0 223 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 ARHGAP28Q9P2N2 729 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 PIN4Q9Y237 131 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 TSPAN1O60635 241 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 ERLIN2O94905 339 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 ACTN1P12814 892 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 SMTNP53814 917 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 COASYQ13057 564 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 AMHR2Q16671 573 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 TAS1R3Q7RTX0 852 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 CDR2LQ86X02 465 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 FAM178BQ8IXR5 827 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 APBB2Q92870 758 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 RNPC3Q96LT9 517 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 NTPCRQ9BSD7 190 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 CCDC113Q9H0I3 377 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 C2orf40Q9H1Z8 148 aa19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 COLQQ9Y215 455 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-208ENST00000493815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 FRMD3A2A2Y4 597 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 DENND3A2RUS2 1198 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 K7ENM7 598 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 K7ERI5 159 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 KINO60870 393 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 HOXA11P31270 313 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 BMP8BP34820 402 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 PNOCQ13519 176 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 MAPK6Q16659 721 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 ZC2HC1CQ53FD0 456 aaPredicted RBP19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 PRPF38BQ5VTL8 546 aaKnown RBP19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 HAUS6Q7Z4H7 955 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 CCDC65Q8IXS2 484 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 HERVK_113Q902F9 699 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 ADAM2Q99965 735 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 PRO3102Q9H379 93 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 FZD8Q9H461 694 aa19.7■□□□□ 0.74
PDLIM7-208ENST00000493815 ABHD14A-ACY1A0A1B0GW23 586 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 GOLGA6L22H0YM25 854 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 ENPP3O14638 875 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 GTPBP6O43824 516 aaPredicted RBP19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 PRKCBP05771 671 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 MAPTP10636 758 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 CASP5P51878 434 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 NCKAP1LP55160 1127 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 WDR5P61964 334 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 DEFB103AP81534 67 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 CNNM4Q6P4Q7 775 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 GLIS3Q8NEA6 775 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 MRPL44Q9H9J2 332 aaKnown RBP19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 AGPAT5Q9NUQ2 364 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms