RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SPG21Q9NZD8 308 aa16.37■□□□□ 0.21
ATG4B-223ENST00000493618 INPP5FQ9Y2H2 1132 aa16.37■□□□□ 0.21
ATG4B-223ENST00000493618 HIDE1A8MVS5 230 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 SLITRK3O94933 977 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 CA8P35219 290 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 RFC5P40937 340 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 TXKP42681 527 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 BCAR1P56945 870 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 LAMTOR4Q0VGL1 99 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 OTUD6AQ7L8S5 288 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 PSPC1Q8WXF1 523 aaKnown RBP16.36■□□□□ 0.21
ATG4B-223ENST00000493618 APOL5Q9BWW9 433 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 FAM105AQ9NUU6 356 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 PUF60Q9UHX1 559 aaKnown RBP16.36■□□□□ 0.21
ATG4B-223ENST00000493618 PCDHA12Q9UN75 941 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 LZTS1Q9Y250 596 aa16.36■□□□□ 0.21
ATG4B-223ENST00000493618 NEMFO60524 1076 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 GPR37L1O60883 481 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATG4B-223ENST00000493618 PPM1AP35813 382 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 KRT17Q04695 432 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 COASYQ13057 564 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 TMC7Q7Z402 723 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 SLC39A11Q8N1S5 342 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 SMRP1Q8NCR6 262 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 MTRQ99707 1265 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 MRPL9Q9BYD2 267 aaKnown RBP16.35■□□□□ 0.21
ATG4B-223ENST00000493618 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-223ENST00000493618 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
ATG4B-223ENST00000493618 USP15Q9Y4E8 981 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-223ENST00000493618 DCXO43602 365 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 EYA4O95677 639 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 PDE12Q6L8Q7 609 aaKnown RBP16.34■□□□□ 0.21
ATG4B-223ENST00000493618 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-223ENST00000493618 EXOC8Q8IYI6 725 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 RNF149Q8NC42 400 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 TMEM60Q9H2L4 133 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 TBC1D13Q9NVG8 400 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
ATG4B-223ENST00000493618 POTEMA6NI47 508 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
ATG4B-223ENST00000493618 OFD1O75665 1012 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 SKIP12755 728 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 ALADP13716 330 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 MCM7P33993 719 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 TECP42680 631 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 ALDH7A1P49419 539 aaKnown RBP16.33■□□□□ 0.2
ATG4B-223ENST00000493618 NOMO2Q5JPE7 1267 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 RNF135Q8IUD6 432 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 PIGOQ8TEQ8 1089 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 BCL7CQ8WUZ0 217 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-223ENST00000493618 AUTS2Q8WXX7 1259 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
ATG4B-223ENST00000493618 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-223ENST00000493618 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 DNAJB4Q9UDY4 337 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 MUTYHQ9UIF7 546 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
ATG4B-223ENST00000493618 B4GALT3O60512 393 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 PLA2G5P39877 138 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 RAB27AP51159 221 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 RNASELQ05823 741 aaKnown RBP16.32■□□□□ 0.2
ATG4B-223ENST00000493618 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
ATG4B-223ENST00000493618 ANKRD54Q6NXT1 300 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 AGMOQ6ZNB7 445 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 ASAP3Q8TDY4 903 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 PGBD4Q96DM1 585 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 TMEM169Q96HH4 297 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 CPB2Q96IY4 423 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
ATG4B-223ENST00000493618 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
ATG4B-223ENST00000493618 NGRNQ9NPE2 291 aaKnown RBP16.32■□□□□ 0.2
ATG4B-223ENST00000493618 C2orf71A6NGG8 1288 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 ASAP2O43150 1006 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
ATG4B-223ENST00000493618 ZNF623O75123 536 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 CXCL14O95715 111 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-223ENST00000493618 HOXA11P31270 313 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-223ENST00000493618 SLC11A1P49279 550 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 AFF1P51825 1210 aaKnown RBP16.31■□□□□ 0.2
ATG4B-223ENST00000493618 KCNC3Q14003 757 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 SAFBQ15424 915 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATG4B-223ENST00000493618 ZNF174Q15697 407 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 MAEAQ7L5Y9 396 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
ATG4B-223ENST00000493618 VPS52Q8N1B4 723 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms