RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FUT2Q10981 343 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 NLRP7Q8WX94 980 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 NRBP2Q9NSY0 501 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 DPP7Q9UHL4 492 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 PATJQ8NI35 1801 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 WDR64B1ANS9 1081 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF862O60290 1169 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 SLC11A1P49279 550 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 RNASELQ05823 741 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 SLC44A3Q8N4M1 653 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 RIN2Q8WYP3 895 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF668Q96K58 619 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 GCOM2Q9BZD3 368 aaPredicted RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 MRPL17Q9NRX2 175 aaKnown RBP16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 CLUHO75153 1309 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 GPR179Q6PRD1 2367 aa16.08■□□□□ 0.16
PRPF40A-211ENST00000493468 OFD1O75665 1012 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 PRKCEQ02156 737 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 SYNE3Q6ZMZ3 975 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 C1orf210Q8IVY1 113 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 SUMF1Q8NBK3 374 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 RSAD2Q8WXG1 361 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 LPPQ93052 612 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 TMEM175Q9BSA9 504 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 MAN1C1Q9NR34 630 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 FAM105AQ9NUU6 356 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 CA14Q9ULX7 337 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 SIT1Q9Y3P8 196 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 SAMM50Q9Y512 469 aa16.07■□□□□ 0.16
PRPF40A-211ENST00000493468 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 ESYT2A0FGR8 921 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 B4GALT3O60512 393 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 C1RP00736 705 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 SDHBP21912 280 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 CNTNAP3BQ96NU0 1288 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 CNTNAP3Q9BZ76 1288 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 ARHGEF3Q9NR81 526 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 SLC2A4RGQ9NR83 387 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 SSX2IPQ9Y2D8 614 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 INPP5FQ9Y2H2 1132 aa16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
PRPF40A-211ENST00000493468 SPTBN2O15020 2390 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 IGKV6-21A0A0C4DH24 114 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 CCDC195A0A1B0GUA6 201 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 MEIS3P2A8K0S8 358 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 INPPL1O15357 1258 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 SOD2P04179 222 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 URODP06132 367 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 ADH1AP07327 375 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 DCNP07585 359 aaKnown RBP16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 CIITAP33076 1130 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 RTN1Q16799 776 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF528Q3MIS6 628 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 ZNF280BQ86YH2 543 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 URGCPQ8TCY9 931 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 GPR152Q8TDT2 470 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 LENG9Q96B70 501 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 MYADMQ96S97 322 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 GBP3Q9H0R5 595 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
PRPF40A-211ENST00000493468 CNTNAP2Q9UHC6 1331 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 ANHXE9PGG2 379 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 SLC27A2O14975 620 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 SPTLC1O15269 473 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 KINO60870 393 aaKnown RBP16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 CSDE1O75534 798 aaKnown RBP16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 KRT37O76014 449 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 GLUD1P00367 558 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 SFNP31947 248 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 DRP2Q13474 957 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 RSPO4Q2I0M5 234 aaPredicted RBP16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 PRR16Q569H4 304 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 SPECC1Q5M775 1068 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 DCLK2Q8N568 766 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 PJA1Q8NG27 643 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 CEP89Q96ST8 783 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 NIFKQ9BYG3 293 aaKnown RBP16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 LRRC2Q9BYS8 371 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 ZMYND12Q9H0C1 365 aa16.04■□□□□ 0.16
PRPF40A-211ENST00000493468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms