RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ELOA2Q8IYF1 753 aaPredicted RBP18.97■□□□□ 0.63
LIME1-208ENST00000493265 SYAP1Q96A49 352 aaPredicted RBP18.97■□□□□ 0.63
LIME1-208ENST00000493265 OSMRQ99650 979 aa18.97■□□□□ 0.63
LIME1-208ENST00000493265 TTYH1Q9H313 450 aaPredicted RBP18.97■□□□□ 0.63
LIME1-208ENST00000493265 HIPK3Q9H422 1215 aa18.97■□□□□ 0.63
LIME1-208ENST00000493265 MRPL44Q9H9J2 332 aaKnown RBP18.97■□□□□ 0.63
LIME1-208ENST00000493265 TRPV2Q9Y5S1 764 aa18.97■□□□□ 0.63
LIME1-208ENST00000493265 CDH23Q9H251 3354 aa18.97■□□□□ 0.63
LIME1-208ENST00000493265 UMODL1Q5DID0 1318 aa18.97■□□□□ 0.63
LIME1-208ENST00000493265 MYH11P35749 1972 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 PVALEFA0A1B0GWK0 134 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 K7ENM7 598 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 GPR32O75388 356 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 CHRNA1P02708 482 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 CYP2C18P33260 490 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 NAMPTP43490 491 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 PHKA2P46019 1235 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 SMTNP53814 917 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 EPHB4P54760 987 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 CAGE1Q8TC20 777 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 RNPC3Q96LT9 517 aaKnown RBP18.96■□□□□ 0.63
LIME1-208ENST00000493265 NOC4LQ9BVI4 516 aaKnown RBP18.96■□□□□ 0.63
LIME1-208ENST00000493265 CELF4Q9BZC1 486 aaKnown RBP18.96■□□□□ 0.63
LIME1-208ENST00000493265 ADAMTS10Q9H324 1103 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 SLC39A2Q9NP94 309 aa18.96■□□□□ 0.63
LIME1-208ENST00000493265 FRMD3A2A2Y4 597 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 RAG1P15918 1043 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 CCL23P55773 120 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 FAM26FQ5R3K3 315 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 ZBTB8OSQ8IWT0 167 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 FGFBP2Q9BYJ0 223 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 GCOM2Q9BZD3 368 aaPredicted RBP18.95■□□□□ 0.62
LIME1-208ENST00000493265 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 RMND1Q9NWS8 449 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 KIAA1468Q9P260 1216 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 MAN1B1Q9UKM7 699 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 TBX21Q9UL17 535 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 ADGRA3Q8IWK6 1321 aa18.95■□□□□ 0.62
LIME1-208ENST00000493265 INO80B-WBP1J3KQ70 363 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 GCNT3O95395 438 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 RPLP2P05387 115 aaKnown RBP18.94■□□□□ 0.62
LIME1-208ENST00000493265 SELPP16109 830 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 FGFR4P22455 802 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 CRYBB1P53674 252 aaPredicted RBP18.94■□□□□ 0.62
LIME1-208ENST00000493265 CDC42EP1Q00587 391 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 ZC2HC1CQ53FD0 456 aaPredicted RBP18.94■□□□□ 0.62
LIME1-208ENST00000493265 LRRC8DQ7L1W4 858 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 HAUS6Q7Z4H7 955 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 RPAINQ86UA6 219 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 ZNF410Q86VK4 478 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 GLIS3Q8NEA6 775 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 SPIRE2Q8WWL2 714 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 SCLYQ96I15 445 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 GSDMAQ96QA5 445 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 INO80BQ9C086 356 aaPredicted RBP18.94■□□□□ 0.62
LIME1-208ENST00000493265 SEL1LQ9UBV2 794 aa18.94■□□□□ 0.62
LIME1-208ENST00000493265 VCANP13611 3396 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 DENND3A2RUS2 1198 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 CAND2O75155 1236 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 MYBP10242 640 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 GHRP10912 638 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 FOSL2P15408 326 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 CASP5P51878 434 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 PTENP60484 403 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 FPGSQ05932 587 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 MGAT3Q09327 533 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 SMYD4Q8IYR2 804 aaPredicted RBP18.93■□□□□ 0.62
LIME1-208ENST00000493265 TMEM40Q8WWA1 233 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 OSBPL7Q9BZF2 842 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 MINDY3Q9H8M7 445 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 IFT122Q9HBG6 1241 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 GDAQ9Y2T3 454 aa18.93■□□□□ 0.62
LIME1-208ENST00000493265 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 PITPNM1O00562 1244 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 DARSP14868 501 aaKnown RBP18.92■□□□□ 0.62
LIME1-208ENST00000493265 SARSP49591 514 aaKnown RBP18.92■□□□□ 0.62
LIME1-208ENST00000493265 NCKAP1LP55160 1127 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 STK4Q13043 487 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 KCNB1Q14721 858 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 L1TD1Q5T7N2 865 aaKnown RBP18.92■□□□□ 0.62
LIME1-208ENST00000493265 TRAF7Q6Q0C0 670 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
LIME1-208ENST00000493265 C2orf40Q9H1Z8 148 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 OLFML3Q9NRN5 406 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 MAPK8IP1Q9UQF2 711 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
LIME1-208ENST00000493265 NOC2LQ9Y3T9 749 aaKnown RBP18.92■□□□□ 0.62
LIME1-208ENST00000493265 K7ERI5 159 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 PRPF6O94906 941 aaKnown RBP18.91■□□□□ 0.62
LIME1-208ENST00000493265 IQCF3P0C7M6 154 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 MAPTP10636 758 aaKnown RBP18.91■□□□□ 0.62
LIME1-208ENST00000493265 EIF4BP23588 611 aaKnown RBP18.91■□□□□ 0.62
LIME1-208ENST00000493265 EHHADHQ08426 723 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 RBL2Q08999 1139 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 PSMD2Q13200 908 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 TMEM132AQ24JP5 1023 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms