RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 FLT3LGP49771 235 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 ZNF699Q32M78 642 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 PLPPR4Q7Z2D5 763 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 ZSCAN30Q86W11 494 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 FMR1NBQ8N0W7 255 aaPredicted RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 TTC16Q8NEE8 873 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 GPT2Q8TD30 523 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 TRIM62Q9BVG3 475 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 UBR3Q6ZT12 1888 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 NRCAMQ92823 1304 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 THAP12O43422 761 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 SHC4Q6S5L8 630 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 REPS2Q8NFH8 660 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 MAIP1Q8WWC4 291 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 BRI3BPQ8WY22 251 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 KIF12Q96FN5 646 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 CALR3Q96L12 384 aaKnown RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 REEP2Q9BRK0 252 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 FAM207AQ9NSI2 230 aaPredicted RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 RBAKQ9NYW8 714 aaPredicted RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 GCNT4Q9P109 453 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 TRPV2Q9Y5S1 764 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 TTC36A6NLP5 189 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 SPATA31C2B4DYI2 1134 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 PARNO95453 639 aaKnown RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 CDC25BP30305 580 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 VAMP7P51809 220 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 CNTN2Q02246 1040 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 KRT17Q04695 432 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 CRHR2Q13324 411 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 HADHQ16836 314 aaKnown RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 PDZD4Q76G19 769 aaPredicted RBP6.8□□□□□ -1.32
NF1-215ENST00000493220 NECAB2Q7Z6G3 386 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 PPTC7Q8NI37 304 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 HHIPL1Q96JK4 782 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 PAXBP1Q9Y5B6 917 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 LRP5O75197 1615 aa6.8□□□□□ -1.32
NF1-215ENST00000493220 PP2D1A8MPX8 630 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 SPOPO43791 374 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 ZNF286BP0CG31 522 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 PNPLA4P41247 253 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 HIRAP54198 1017 aaPredicted RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 POLR2FP61218 127 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 NOLC1Q14978 699 aaKnown RBP eCLIP6.79□□□□□ -1.32
NF1-215ENST00000493220 MAP9Q49MG5 647 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 PLA2G4FQ68DD2 849 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 ZNF513Q8N8E2 541 aaPredicted RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 EHD2Q9NZN4 543 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 GOLGA8IPA6NC78 632 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 FAM205CA6NFA0 338 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 GOLGA8JA6NMD2 632 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 GJC1P36383 396 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 NSFP46459 744 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 GOLGA8FQ08AF8 430 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 GOLGA8DPQ0D2H9 430 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 SV2CQ496J9 727 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CCDC186Q7Z3E2 898 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 COLEC11Q9BWP8 271 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 TMEM63CQ9P1W3 806 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CTTNBP2NLQ9P2B4 639 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 EXTL3O43909 919 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 EFCAB14O75071 495 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 LGALS2P05162 132 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CYP2C19P33261 490 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 ARPP19P56211 112 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 TUBB4BP68371 445 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 DUOXA2Q1HG44 320 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CCDC144BQ3MJ40 725 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 TCP11X2Q5H9J9 407 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CEP128Q6ZU80 1094 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 METTL16Q86W50 562 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 GOLPH3LQ9H4A5 285 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 DDX20Q9UHI6 824 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 RREB1Q92766 1687 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 hCG_2014768A0A024R1R8 64 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CTAGE9A4FU28 777 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 PHF20L1A8MW92 1017 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 H7C4K7 107 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 ZRANB2O95218 330 aaKnown RBP eCLIP6.79□□□□□ -1.32
NF1-215ENST00000493220 TMEM132DQ14C87 1099 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 SIX6OS1Q8N1H7 587 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 JAKMIP2Q96AA8 810 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 ZBED3Q96IU2 234 aaPredicted RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 HEXIM2Q96MH2 286 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 NCAPGQ9BPX3 1015 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CCDC88AQ3V6T2 1871 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 MOXD2PA6NHM9 499 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 AOC2O75106 756 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CLTAP09496 248 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 UBA1P22314 1058 aaKnown RBP6.79□□□□□ -1.32
NF1-215ENST00000493220 GUCY2CP25092 1073 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 RBP5P82980 135 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 TUBB2AQ13885 445 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 C10orf76Q5T2E6 689 aa6.79□□□□□ -1.32
NF1-215ENST00000493220 CLEC17AQ6ZS10 378 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms