RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 SPATA6Q9NWH7 488 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-214ENST00000492858 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
GPNMB-214ENST00000492858 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 FAM86B1E9PN63 330 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 PSAPP07602 524 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 FAM86B2P0C5J1 330 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 AK2P54819 239 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 NAPAP54920 295 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF528Q3MIS6 628 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 WWC2Q6AWC2 1192 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 ELMSAN1Q6PJG2 1045 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 CASC1Q6TDU7 716 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 ATRIPQ8WXE1 791 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 SHDQ96IW2 340 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 FAM167AQ96KS9 214 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 RTKNQ9BST9 563 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 RIC8AQ9NPQ8 531 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 SLC2A4RGQ9NR83 387 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 FBXO4Q9UKT5 387 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 SMG5Q9UPR3 1016 aaKnown RBP13.63□□□□□ -0.23
GPNMB-214ENST00000492858 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 CACNA1IQ9P0X4 2223 aa13.63□□□□□ -0.23
GPNMB-214ENST00000492858 OFD1O75665 1012 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 GLUD1P00367 558 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 URODP06132 367 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ADH1AP07327 375 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ADRB1P08588 477 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 SKIP12755 728 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 LAMP2P13473 410 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ADCY7P51828 1080 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 STARD6P59095 220 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 HTR4Q13639 388 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 TYW1BQ6NUM6 668 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF746Q6NUN9 644 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 BORCS6Q96GS4 357 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF577Q9BSK1 485 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 TRAIPQ9BWF2 469 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 RHOBTB2Q9BYZ6 727 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 PIN4Q9Y237 131 aaKnown RBP13.62□□□□□ -0.23
GPNMB-214ENST00000492858 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 NUMBLQ9Y6R0 609 aa13.62□□□□□ -0.23
GPNMB-214ENST00000492858 ANHXE9PGG2 379 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 SH2B2O14492 632 aaPredicted RBP13.61□□□□□ -0.23
GPNMB-214ENST00000492858 TEX28O15482 410 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 PRC1O43663 620 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 CALM1P0DP23 149 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 CALM2P0DP24 149 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 CALM3P0DP25 149 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 TMTC2Q8N394 836 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 URGCPQ8TCY9 931 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF707Q96C28 371 aaPredicted RBP13.61□□□□□ -0.23
GPNMB-214ENST00000492858 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 GCOM2Q9BZD3 368 aaPredicted RBP13.61□□□□□ -0.23
GPNMB-214ENST00000492858 TBC1D22BQ9NU19 505 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 FAM105AQ9NUU6 356 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 SAMM50Q9Y512 469 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 BAHCC1Q9P281 2608 aa13.61□□□□□ -0.23
GPNMB-214ENST00000492858 IGLV3-22A0A075B6J6 115 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 KANSL1LA0AUZ9 987 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF862O60290 1169 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 DDHD2O94830 711 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 SOD2P04179 222 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 OATP04181 439 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 ALDH2P05091 517 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 SPATA31D3P0C874 917 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
GPNMB-214ENST00000492858 GPC5P78333 572 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 NUCB1Q02818 461 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 DRP2Q13474 957 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
GPNMB-214ENST00000492858 UBXN2BQ14CS0 331 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 PPP1R18Q6NYC8 613 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 SPATA31D4Q6ZUB0 917 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 TEX2Q8IWB9 1127 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 RPP25Q9BUL9 199 aaKnown RBP13.6□□□□□ -0.23
GPNMB-214ENST00000492858 EPC1Q9H2F5 836 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
GPNMB-214ENST00000492858 ASPMQ8IZT6 3477 aa13.59□□□□□ -0.23
GPNMB-214ENST00000492858 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
GPNMB-214ENST00000492858 NRP1O14786 923 aa13.59□□□□□ -0.23
GPNMB-214ENST00000492858 ZNF623O75123 536 aa13.59□□□□□ -0.23
GPNMB-214ENST00000492858 TGM1P22735 817 aa13.59□□□□□ -0.23
GPNMB-214ENST00000492858 RAB27AP51159 221 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms