RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 PDGFRBP09619 1106 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 FNTBP49356 437 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 GUCY2FP51841 1108 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 HERVK_113P62684 666 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 MOGSQ13724 837 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 INAVAQ3KP66 663 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 PLEKHG6Q3KR16 790 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 GPR158Q5T848 1215 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 BROXQ5VW32 411 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 DPP8Q6V1X1 898 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 CMIPQ8IY22 773 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 CBARPQ8N350 705 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 SLC5A5Q92911 643 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 AMNQ9BXJ7 453 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 CCDC8Q9H0W5 538 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 ACSS2Q9NR19 701 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 TOMM22Q9NS69 142 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 HOMER2Q9NSB8 354 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 TYW1Q9NV66 732 aaKnown RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 SLC5A4Q9NY91 659 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 PRAMEF25A6NGN4 478 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNF839A8K0R7 811 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 CAPN14A8MX76 684 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 PFKPQ01813 784 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 OCRLQ01968 901 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 FOXL1Q12952 345 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 LRRC32Q14392 662 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 SART3Q15020 963 aaKnown RBP4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 PDCD1Q15116 288 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 EPHA7Q15375 998 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 DDB1Q16531 1140 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 ADGRE4PQ86SQ3 457 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 GLCCI1Q86VQ1 547 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 TMPRSS6Q8IU80 811 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 CNTD1Q8N815 330 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNF610Q8N9Z0 462 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 RTF1Q92541 710 aaKnown RBP4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNF496Q96IT1 587 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 GBP4Q96PP9 640 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 NELFAQ9H3P2 528 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 RIOX1Q9H6W3 641 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 SLC39A2Q9NP94 309 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 TOPORSQ9NS56 1045 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 CEP72Q9P209 647 aa4.02□□□□□ -1.77
HMGB1P30-201ENST00000492455 ALG1L2C9J202 215 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 GOLGA6L22H0YM25 854 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 FZD9O00144 591 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 GABRDO14764 452 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ARHGAP6O43182 974 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ULK1O75385 1050 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 IL18BPO95998 194 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRLP01236 227 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 CYP17A1P05093 508 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 CDK4P11802 303 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 CPEP16870 476 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ADRA1BP35368 520 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 MYBPC3Q14896 1274 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNF174Q15697 407 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 EPHA10Q5JZY3 1008 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZBTB41Q5SVQ8 909 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 SYCE2Q6PIF2 218 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 LRSAM1Q6UWE0 723 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 HDGFL2Q7Z4V5 671 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 RASSF3Q86WH2 238 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 RAVER1Q8IY67 606 aaKnown RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 D2HGDHQ8N465 521 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNF764Q96H86 408 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 TACO1Q9BSH4 297 aaKnown RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 PUS7LQ9H0K6 701 aaKnown RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 PCIF1Q9H4Z3 704 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 PLA2G3Q9NZ20 509 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZNHIT2Q9UHR6 403 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 TRHDEQ9UKU6 1024 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 THRAP3Q9Y2W1 955 aaKnown RBP4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ASB1Q9Y576 335 aa4.01□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRAMEF22A3QJZ6 481 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 ELL2O00472 640 aaPredicted RBP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 GCP02774 474 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 ITGB6P18564 788 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 KRT4P19013 534 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 PTGS1P23219 599 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 LSP1P33241 339 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 PTGS2P35354 604 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 SESN3P58005 492 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 KRTAP10-11P60412 298 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 EXOSC10Q01780 885 aaKnown RBP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 ALDH6A1Q02252 535 aaKnown RBP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 COL10A1Q03692 680 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 DUSP8Q13202 625 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 TOP3AQ13472 1001 aaPredicted RBP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 NFYCQ13952 458 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 GRM7Q14831 915 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 NOLC1Q14978 699 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P30-201ENST00000492455 EP400NLQ6ZTU2 488 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 C11orf74Q86VG3 221 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 ZDHHC5Q9C0B5 715 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 PRDM12Q9H4Q4 367 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 UCKL1Q9NWZ5 548 aa4□□□□□ -1.77
HMGB1P30-201ENST00000492455 KLHL42Q9P2K6 505 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms