RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 C1orf112Q9NSG2 853 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 AGPAT5Q9NUQ2 364 aa16.83■□□□□ 0.28
SS18L1-204ENST00000491916 FNDC1Q4ZHG4 1894 aaPredicted RBP16.82■□□□□ 0.28
SS18L1-204ENST00000491916 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 A0A0U1RQF3 1178 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 DENND3A2RUS2 1198 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 TSPAN1O60635 241 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 HIP1RO75146 1068 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 EDN1P05305 212 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
SS18L1-204ENST00000491916 PHKA2P46019 1235 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 GATMP50440 423 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 TFDP1Q14186 410 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 MCM6Q14566 821 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 PPP2R2DQ66LE6 453 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 SHC4Q6S5L8 630 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 RAD54LQ92698 747 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 CCDC113Q9H0I3 377 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 ELAC1Q9H777 363 aaKnown RBP16.82■□□□□ 0.28
SS18L1-204ENST00000491916 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 PCDHA7Q9UN72 937 aa16.82■□□□□ 0.28
SS18L1-204ENST00000491916 B4GALT5O43286 388 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 NAMPTP43490 491 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 KIFAP3Q92845 792 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 CDX2Q99626 313 aaPredicted RBP16.81■□□□□ 0.28
SS18L1-204ENST00000491916 KIFC3Q9BVG8 833 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 FZD8Q9H461 694 aa16.81■□□□□ 0.28
SS18L1-204ENST00000491916 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
SS18L1-204ENST00000491916 LRRIQ4A6NIV6 560 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 CUTAO60888 179 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 ZSCAN20P17040 1043 aaPredicted RBP16.8■□□□□ 0.28
SS18L1-204ENST00000491916 ERVK-21P61565 698 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 FAM187BQ17R55 369 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 TAS1R3Q7RTX0 852 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 YME1L1Q96TA2 773 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
SS18L1-204ENST00000491916 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 TMEM161AQ9NX61 479 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 KCND2Q9NZV8 630 aa16.8■□□□□ 0.28
SS18L1-204ENST00000491916 MYH11P35749 1972 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 MEIS3P2A8K0S8 358 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 INO80B-WBP1J3KQ70 363 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 ZNF623O75123 536 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 SSBP05455 408 aaKnown RBP eCLIP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 FGFR1P11362 822 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 ARF4P18085 180 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 NPTX2P47972 431 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 GIT2Q14161 759 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 ADGRE1Q14246 886 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 PCBP1Q15365 356 aaKnown RBP eCLIP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 E2F4Q16254 413 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 KCNG4Q8TDN1 519 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 LEO1Q8WVC0 666 aaPredicted RBP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 LARP4BQ92615 738 aaKnown RBP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 CLP1Q92989 425 aaKnown RBP16.79■□□□□ 0.28
SS18L1-204ENST00000491916 CPB2Q96IY4 423 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 CASD1Q96PB1 797 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 PANK2Q9BZ23 570 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 CERS4Q9HA82 394 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 ARHGAP28Q9P2N2 729 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 USP20Q9Y2K6 914 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
SS18L1-204ENST00000491916 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
SS18L1-204ENST00000491916 RFXAPO00287 272 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 LPXNO60711 386 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 SLC34A2O95436 690 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 STAG3L1P0CL83 205 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 AXLP30530 894 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 ZNF131P52739 623 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 PEX3P56589 373 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
SS18L1-204ENST00000491916 CLLU1OSQ5K130 101 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 MRPL10Q7Z7H8 261 aaKnown RBP16.78■□□□□ 0.28
SS18L1-204ENST00000491916 GPBP1Q86WP2 473 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 SMG8Q8ND04 991 aaKnown RBP16.78■□□□□ 0.28
SS18L1-204ENST00000491916 MYLIPQ8WY64 445 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 REEP2Q9BRK0 252 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 C17orf80Q9BSJ5 609 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 EIF2AQ9BY44 585 aaKnown RBP16.78■□□□□ 0.28
SS18L1-204ENST00000491916 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 FAM105AQ9NUU6 356 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 DACT1Q9NYF0 836 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 HCSTQ9UBK5 93 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
SS18L1-204ENST00000491916 KIAA1671Q9BY89 1806 aa16.77■□□□□ 0.28
SS18L1-204ENST00000491916 A0A1B0GUA9 196 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms