RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 C1QTNF9P0C862 333 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 KLRC2P26717 231 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 SREBF1P36956 1147 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 LIFRP42702 1097 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 ADCY7P51828 1080 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 NAPAP54920 295 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 LETM2Q2VYF4 491 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 EFCAB12Q6NXP0 572 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 SYNE3Q6ZMZ3 975 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 PLA2G4DQ86XP0 818 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 IGSF21Q96ID5 467 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 SSX2IPQ9Y2D8 614 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 PCDHA10Q9Y5I2 948 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
CLCNKA-206ENST00000491433 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 IPO5O00410 1097 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 PRC1O43663 620 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 DARSP14868 501 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 RAB27AP51159 221 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 CLCN3P51790 818 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 PTH1RQ03431 593 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 RNASELQ05823 741 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 CMASQ8NFW8 434 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 INO80BQ9C086 356 aaPredicted RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 IL25Q9H293 177 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 ADAMTS10Q9H324 1103 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 NRBP2Q9NSY0 501 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
CLCNKA-206ENST00000491433 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 CYSRT1A8MQ03 144 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 IGHDP01880 384 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 SRFP11831 508 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 ATP4AP20648 1035 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 GBP2P32456 591 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 CLCN4P51793 760 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 N4BP2L1Q5TBK1 243 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 GCOM2Q9BZD3 368 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-206ENST00000491433 WDR81Q562E7 1941 aa12.58□□□□□ -0.39
CLCNKA-206ENST00000491433 CNOT1A5YKK6 2376 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 hCG_1642624A0A1W2PR95 340 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 DHX15O43143 795 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 GALTP07902 379 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 CFHP08603 1231 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 CYP3A4P08684 503 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 PHKA2P46019 1235 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 GPC3P51654 580 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 PTPN14Q15678 1187 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 NOMO2Q5JPE7 1267 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 WWC2Q6AWC2 1192 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 TWF2Q6IBS0 349 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 URGCPQ8TCY9 931 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 AUTS2Q8WXX7 1259 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 MAP4K1Q92918 833 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 SHDQ96IW2 340 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 KLHL5Q96PQ7 755 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 TBC1D17Q9HA65 648 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 EPS15L1Q9UBC2 864 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 GABBR1Q9UBS5 961 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 GMEB2Q9UKD1 530 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
CLCNKA-206ENST00000491433 WDR64B1ANS9 1081 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 C1RP00736 705 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 ADH1AP07327 375 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 RXRAP19793 462 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 TGM1P22735 817 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 CHMLP26374 656 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 DNM2P50570 870 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
CLCNKA-206ENST00000491433 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms