RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
LSM2-213ENST00000491421 SRGAP1Q7Z6B7 1085 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ADHFE1Q8IWW8 467 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 RSPH1Q8WYR4 309 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 MRPS27Q92552 414 aaKnown RBP9.22□□□□□ -0.93
LSM2-213ENST00000491421 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ZSCAN31Q96LW9 406 aaPredicted RBP9.22□□□□□ -0.93
LSM2-213ENST00000491421 MTRQ99707 1265 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 HSD17B14Q9BPX1 270 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 EPHX3Q9H6B9 360 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 ENTPD7Q9NQZ7 604 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 SPG21Q9NZD8 308 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 CD207Q9UJ71 328 aa9.22□□□□□ -0.93
LSM2-213ENST00000491421 MYH9P35579 1960 aaKnown RBP9.21□□□□□ -0.93
LSM2-213ENST00000491421 FSD2A1L4K1 749 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 FSCN2O14926 492 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 PER2O15055 1255 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 ASAP2O43150 1006 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 MBTPS2O43462 519 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 LYPLA2O95372 231 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 COL9A1P20849 921 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 ALDH7A1P49419 539 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 GNL2Q13823 731 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 MXD4Q14582 209 aaPredicted RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 SMAD2Q15796 467 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 C8orf34Q49A92 452 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 PLPP4Q5VZY2 271 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 GLB1LQ6UWU2 654 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 FERMT3Q86UX7 667 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 FAM184AQ8NB25 1140 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 RNF149Q8NC42 400 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
LSM2-213ENST00000491421 LPPQ93052 612 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 MSLNLQ96KJ4 702 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 MTMR9Q96QG7 549 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 CDCA3Q99618 268 aaPredicted RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 TCF25Q9BQ70 676 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 MINDY3Q9H8M7 445 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 NGRNQ9NPE2 291 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 SH2B1Q9NRF2 756 aaPredicted RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 ANKEF1Q9NU02 776 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 AGPAT5Q9NUQ2 364 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 CLEC1BQ9P126 229 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 BARX2Q9UMQ3 279 aaPredicted RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 INPP5FQ9Y2H2 1132 aa9.21□□□□□ -0.94
LSM2-213ENST00000491421 TCF20Q9UGU0 1960 aaKnown RBP9.21□□□□□ -0.94
LSM2-213ENST00000491421 POTEMA6NI47 508 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 PI4K2BG5E9Z4 385 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 ZNF623O75123 536 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 ZC3H11AO75152 810 aaKnown RBP eCLIP9.2□□□□□ -0.94
LSM2-213ENST00000491421 DGAT1O75907 488 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 ERLIN2O94905 339 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 EYA4O95677 639 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 GLP2RO95838 553 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 SRGAP2BP0DMP2 458 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 HOXA11P31270 313 aaPredicted RBP9.2□□□□□ -0.94
LSM2-213ENST00000491421 RBM25P49756 843 aaKnown RBP9.2□□□□□ -0.94
LSM2-213ENST00000491421 BCAR1P56945 870 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 RNASELQ05823 741 aaKnown RBP9.2□□□□□ -0.94
LSM2-213ENST00000491421 COASYQ13057 564 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 TFDP1Q14186 410 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 DUSP6Q16828 381 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 NOMO2Q5JPE7 1267 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 TMEM31Q5JXX7 168 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 SLC39A11Q8N1S5 342 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 SMRP1Q8NCR6 262 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 PGBD4Q96DM1 585 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 POP1Q99575 1024 aaKnown RBP9.2□□□□□ -0.94
LSM2-213ENST00000491421 KIF2CQ99661 725 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 FOXP1Q9H334 677 aaPredicted RBP9.2□□□□□ -0.94
LSM2-213ENST00000491421 XPNPEP1Q9NQW7 623 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 TBC1D13Q9NVG8 400 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 PCDHB2Q9Y5E7 798 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 EVPLQ92817 2033 aa9.2□□□□□ -0.94
LSM2-213ENST00000491421 LOXHD1Q8IVV2 1947 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 CARNS1A5YM72 827 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 C19orf67A6NJJ6 358 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 MEIS3P2A8K0S8 358 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 HIDE1A8MVS5 230 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 NT5C1B-RDH14C9J2C7 533 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 TSPAN1O60635 241 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 USO1O60763 962 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 OFD1O75665 1012 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 OR52Z1P0C646 297 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 ALADP13716 330 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 CA8P35219 290 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 RARRES1P49788 294 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 PTENP60484 403 aa9.19□□□□□ -0.94
LSM2-213ENST00000491421 RBM10P98175 930 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 NCBP1Q09161 790 aaKnown RBP9.19□□□□□ -0.94
LSM2-213ENST00000491421 ORC2Q13416 577 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms