RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 EFHBQ8N7U6 833 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 MRPS27Q92552 414 aaKnown RBP20.08■□□□□ 0.81
HMGN1-219ENST00000491183 PPP2R3CQ969Q6 453 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 MSLNLQ96KJ4 702 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 ZNF558Q96NG5 402 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 MTRQ99707 1265 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 FOXP1Q9H334 677 aaPredicted RBP20.08■□□□□ 0.81
HMGN1-219ENST00000491183 AGPAT5Q9NUQ2 364 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 CLEC1BQ9P126 229 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 LZTS1Q9Y250 596 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 PER2O15055 1255 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 MBTPS2O43462 519 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 SPATA31C1P0DKV0 1188 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 HOXA11P31270 313 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-219ENST00000491183 ZNF174Q15697 407 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 GJD3Q8N144 294 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 RNF149Q8NC42 400 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 PIGOQ8TEQ8 1089 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 TLE6Q9H808 572 aa20.07■□□□□ 0.8
HMGN1-219ENST00000491183 GLP2RO95838 553 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 SKIP12755 728 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 RARRES1P49788 294 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 PDE12Q6L8Q7 609 aaKnown RBP20.06■□□□□ 0.8
HMGN1-219ENST00000491183 SLC39A11Q8N1S5 342 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 FAM184AQ8NB25 1140 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 SPG21Q9NZD8 308 aa20.06■□□□□ 0.8
HMGN1-219ENST00000491183 MED24O75448 989 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 OFD1O75665 1012 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 XRCC6P12956 609 aaKnown RBP eCLIP20.05■□□□□ 0.8
HMGN1-219ENST00000491183 ARL2P36404 184 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 TECP42680 631 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 NDUFV1P49821 464 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 RAB27AP51159 221 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 BCAR1P56945 870 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
HMGN1-219ENST00000491183 AGMOQ6ZNB7 445 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 MRPL10Q7Z7H8 261 aaKnown RBP20.05■□□□□ 0.8
HMGN1-219ENST00000491183 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 ASAP3Q8TDY4 903 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 PUF60Q9UHX1 559 aaKnown RBP20.05■□□□□ 0.8
HMGN1-219ENST00000491183 CD207Q9UJ71 328 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 FAM50BQ9Y247 325 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 PCDHB2Q9Y5E7 798 aa20.05■□□□□ 0.8
HMGN1-219ENST00000491183 NT5C1B-RDH14C9J2C7 533 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 DGAT1O75907 488 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 PPM1AP35813 382 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 PTENP60484 403 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 ZP2Q05996 745 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 MXD4Q14582 209 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-219ENST00000491183 SMAD2Q15796 467 aaKnown RBP20.04■□□□□ 0.8
HMGN1-219ENST00000491183 DUSP6Q16828 381 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 TTC38Q5R3I4 469 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 C4orf32Q8N8J7 132 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 VN1R2Q8NFZ6 395 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 TCF25Q9BQ70 676 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 MRPL9Q9BYD2 267 aaKnown RBP20.04■□□□□ 0.8
HMGN1-219ENST00000491183 NRDE2Q9H7Z3 1164 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 TUFT1Q9NNX1 390 aa20.04■□□□□ 0.8
HMGN1-219ENST00000491183 C19orf67A6NJJ6 358 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 HIDE1A8MVS5 230 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 EYA4O95677 639 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 OR52Z1P0C646 297 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 GLRA2P23416 452 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 KRT17Q04695 432 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 POU5F1BQ06416 359 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 ORC2Q13416 577 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-219ENST00000491183 SMAD4Q13485 552 aaKnown RBP20.03■□□□□ 0.8
HMGN1-219ENST00000491183 CAPSQ13938 189 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 KCNC3Q14003 757 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 NBR1Q14596 966 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 RABEP1Q15276 862 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 NOMO2Q5JPE7 1267 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 PLPP4Q5VZY2 271 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 GLB1LQ6UWU2 654 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 IFNLR1Q8IU57 520 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-219ENST00000491183 PGBD4Q96DM1 585 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 C1QTNF1Q9BXJ1 281 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 TBC1D13Q9NVG8 400 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 PRKAG3Q9UGI9 489 aa20.03■□□□□ 0.8
HMGN1-219ENST00000491183 BARX2Q9UMQ3 279 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-219ENST00000491183 PI4K2BG5E9Z4 385 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 TSPAN1O60635 241 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.81e-5■□□□□ 9.3
HMGN1-219ENST00000491183 SSTR3P32745 418 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 ALDH7A1P49419 539 aaKnown RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 TOB1P50616 345 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 AFF1P51825 1210 aaKnown RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 COASYQ13057 564 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 TMEM173Q86WV6 379 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 ADHFE1Q8IWW8 467 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 RSPH1Q8WYR4 309 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 CDCA3Q99618 268 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 POLR3CQ9BUI4 534 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 NGRNQ9NPE2 291 aaKnown RBP20.02■□□□□ 0.8
HMGN1-219ENST00000491183 ENTPD7Q9NQZ7 604 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 INPP5FQ9Y2H2 1132 aa20.02■□□□□ 0.8
HMGN1-219ENST00000491183 B4GALT3O60512 393 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms