RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MLKLQ8NB16 471 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 SCLT1Q96NL6 688 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 FDXACB1Q9BRP7 624 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-230ENST00000491028 FUCA2Q9BTY2 467 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 STRA6Q9BX79 667 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-230ENST00000491028 ADAMTS10Q9H324 1103 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 TMEM134Q9H6X4 195 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 DACH1Q9UI36 760 aa20.52■□□□□ 0.88
MCF2L-230ENST00000491028 SRGAP2CP0DJJ0 459 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 MYBP10242 640 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 CASP5P51878 434 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 CRYBB1P53674 252 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-230ENST00000491028 TLE2Q04725 743 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 MGAT3Q09327 533 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 BFSP2Q13515 415 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 BMT2Q1RMZ1 405 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 MYOCDQ8IZQ8 938 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 GUF1Q8N442 669 aaKnown RBP20.51■□□□□ 0.87
MCF2L-230ENST00000491028 KIFC3Q9BVG8 833 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 FGFBP2Q9BYJ0 223 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 CELF4Q9BZC1 486 aaKnown RBP20.51■□□□□ 0.87
MCF2L-230ENST00000491028 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-230ENST00000491028 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-230ENST00000491028 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 TANC1Q9C0D5 1861 aa20.51■□□□□ 0.87
MCF2L-230ENST00000491028 DENND3A2RUS2 1198 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 THPOP40225 353 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 ZNF445P59923 1031 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 TMEM62Q0P6H9 643 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 LRRC26Q2I0M4 334 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 CT47A1Q5JQC4 288 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-230ENST00000491028 L1TD1Q5T7N2 865 aaKnown RBP20.5■□□□□ 0.87
MCF2L-230ENST00000491028 SMYD4Q8IYR2 804 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-230ENST00000491028 GLIS3Q8NEA6 775 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 ZNF507Q8TCN5 953 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 SCFD1Q8WVM8 642 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 PPP1R16BQ96T49 567 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 ATP11BQ9Y2G3 1177 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 CDY2AQ9Y6F7 541 aa20.5■□□□□ 0.87
MCF2L-230ENST00000491028 K7ERI5 159 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 PITPNM1O00562 1244 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 CKBP12277 381 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 DARSP14868 501 aaKnown RBP20.49■□□□□ 0.87
MCF2L-230ENST00000491028 PRCPP42785 496 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 RGS19P49795 217 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 FAAP100Q0VG06 881 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 PCBP1Q15365 356 aaKnown RBP eCLIP20.49■□□□□ 0.87
MCF2L-230ENST00000491028 ZC2HC1CQ53FD0 456 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-230ENST00000491028 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 MAP4K3Q8IVH8 894 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 ADSSL1Q8N142 457 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 ACCSQ96QU6 501 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 OSMRQ99650 979 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 CCDC113Q9H0I3 377 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 PRMT7Q9NVM4 692 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-230ENST00000491028 TBX20Q9UMR3 447 aa20.49■□□□□ 0.87
MCF2L-230ENST00000491028 PSMA7O14818 248 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 CTSHP09668 335 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 MLLT1Q03111 559 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-230ENST00000491028 MBTD1Q05BQ5 628 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 STRN3Q13033 797 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 MAPK6Q16659 721 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 FAM187BQ17R55 369 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 ZNF668Q96K58 619 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-230ENST00000491028 PRIMPOLQ96LW4 560 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 EXOC7Q9UPT5 735 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 GINS2Q9Y248 185 aa20.48■□□□□ 0.87
MCF2L-230ENST00000491028 PPP1R3GB7ZBB8 358 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 INO80B-WBP1J3KQ70 363 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 PRPF6O94906 941 aaKnown RBP20.47■□□□□ 0.87
MCF2L-230ENST00000491028 PRKCBP05771 671 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 CLTBP09497 229 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 EIF4BP23588 611 aaKnown RBP20.47■□□□□ 0.87
MCF2L-230ENST00000491028 ZNF618Q5T7W0 954 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 TAS1R3Q7RTX0 852 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 DHTKD1Q96HY7 919 aaPredicted RBP20.47■□□□□ 0.87
MCF2L-230ENST00000491028 FZD8Q9H461 694 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 CDHR5Q9HBB8 845 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 TBX21Q9UL17 535 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 MAPK8IP1Q9UQF2 711 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 SQORQ9Y6N5 450 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 ALPK3Q96L96 1907 aa20.47■□□□□ 0.87
MCF2L-230ENST00000491028 DNAH12Q6ZR08 3092 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 CAVIN2O95810 425 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 PIGRP01833 764 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 CHRNA1P02708 482 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
MCF2L-230ENST00000491028 SELPP16109 830 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 SFPQP23246 707 aaKnown RBP eCLIP20.46■□□□□ 0.87
MCF2L-230ENST00000491028 ERCC5P28715 1186 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-230ENST00000491028 KNOP1Q1ED39 458 aaKnown RBP20.46■□□□□ 0.87
MCF2L-230ENST00000491028 LRRC8DQ7L1W4 858 aa20.46■□□□□ 0.87
MCF2L-230ENST00000491028 USP38Q8NB14 1042 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms