RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LPPQ93052 612 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 LXNQ9BS40 222 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 TRAIPQ9BWF2 469 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 FAM105AQ9NUU6 356 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 INPP5FQ9Y2H2 1132 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 NT5C1B-RDH14C9J2C7 533 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 DTNBO60941 627 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 SRGAP2CP0DJJ0 459 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 HOXB8P17481 243 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-216ENST00000490796 YWHABP31946 246 aaKnown RBP22.04■■□□□ 1.12
SREBF1-216ENST00000490796 TRIM29Q14134 588 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 XKR9Q5GH70 373 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 POTEDQ86YR6 584 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 C4orf19Q8IY42 314 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 CASP10Q92851 521 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 TMEM143Q96AN5 459 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 MFSD14AQ96MC6 490 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 ZSWIM4Q9H7M6 989 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 BMP2KQ9NSY1 1161 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-216ENST00000490796 PPP4R2Q9NY27 417 aa22.04■■□□□ 1.12
SREBF1-216ENST00000490796 LOC730098B7Z3J9 87 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 GAS2O43903 313 aaKnown RBP22.03■■□□□ 1.12
SREBF1-216ENST00000490796 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 NOMO2Q5JPE7 1267 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 TMEM184AQ6ZMB5 413 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 SRGAP1Q7Z6B7 1085 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 MRPL43Q8N983 215 aaKnown RBP22.03■■□□□ 1.12
SREBF1-216ENST00000490796 NECAB1Q8N987 351 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 URGCPQ8TCY9 931 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 PRPF31Q8WWY3 499 aaKnown RBP22.03■■□□□ 1.12
SREBF1-216ENST00000490796 HAS1Q92839 578 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 DYDC2Q96IM9 177 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 CCDC43Q96MW1 224 aaKnown RBP22.03■■□□□ 1.12
SREBF1-216ENST00000490796 APOL5Q9BWW9 433 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 GBP3Q9H0R5 595 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 RGL1Q9NZL6 768 aa22.03■■□□□ 1.12
SREBF1-216ENST00000490796 ASAP2O43150 1006 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 CTDNEP1O95476 244 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 CXCL14O95715 111 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 CYP4A11Q02928 519 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 NR5A1Q13285 461 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 CBX2Q14781 532 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-216ENST00000490796 TPH2Q8IWU9 490 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 EDAQ92838 391 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 DHX33Q9H6R0 707 aaKnown RBP22.02■■□□□ 1.12
SREBF1-216ENST00000490796 AGPAT5Q9NUQ2 364 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 PCDHB2Q9Y5E7 798 aa22.02■■□□□ 1.12
SREBF1-216ENST00000490796 ZNF623O75123 536 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 NCBP1Q09161 790 aaKnown RBP22.01■■□□□ 1.11
SREBF1-216ENST00000490796 LAMTOR4Q0VGL1 99 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 CTTNQ14247 550 aaKnown RBP22.01■■□□□ 1.11
SREBF1-216ENST00000490796 EMC2Q15006 297 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 CES5AQ6NT32 575 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 HFE2Q6ZVN8 426 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 VPS52Q8N1B4 723 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 ZNF579Q8NAF0 562 aaKnown RBP22.01■■□□□ 1.11
SREBF1-216ENST00000490796 SUSD6Q92537 303 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 FAM193BQ96PV7 902 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-216ENST00000490796 MTRQ99707 1265 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 IFT122Q9HBG6 1241 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 TBC1D13Q9NVG8 400 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 WRAP73Q9P2S5 460 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-216ENST00000490796 PCDHA12Q9UN75 941 aa22.01■■□□□ 1.11
SREBF1-216ENST00000490796 PIEZO1Q92508 2521 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22■■□□□ 1.11
SREBF1-216ENST00000490796 C2orf71A6NGG8 1288 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 ERLIN2O94905 339 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 CALCRLQ16602 461 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
SREBF1-216ENST00000490796 RNF149Q8NC42 400 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 GTF3C6Q969F1 213 aa22■■□□□ 1.11
SREBF1-216ENST00000490796 FAM205CA6NFA0 338 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 OFD1O75665 1012 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 NEK4P51957 841 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 FOSBP53539 338 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 KCNC3Q14003 757 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 GIT2Q14161 759 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 ME3Q16798 604 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 SYCE2Q6PIF2 218 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 ZBTB33Q86T24 672 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 IGSF21Q96ID5 467 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 S1PR5Q9H228 398 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 NRDE2Q9H7Z3 1164 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 HCFC2Q9Y5Z7 792 aa21.99■■□□□ 1.11
SREBF1-216ENST00000490796 CLASP2O75122 1294 aaKnown RBP21.98■■□□□ 1.11
SREBF1-216ENST00000490796 GALTP07902 379 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 FDPSP14324 419 aaKnown RBP21.98■■□□□ 1.11
SREBF1-216ENST00000490796 TFDP1Q14186 410 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 MXD4Q14582 209 aaPredicted RBP21.98■■□□□ 1.11
SREBF1-216ENST00000490796 TRIM67Q6ZTA4 783 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 DDX53Q86TM3 631 aaKnown RBP21.98■■□□□ 1.11
SREBF1-216ENST00000490796 FERMT3Q86UX7 667 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 EIF2AK1Q9BQI3 630 aaKnown RBP21.98■■□□□ 1.11
SREBF1-216ENST00000490796 KCNH6Q9H252 994 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 RSAD1Q9HA92 442 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 TSHZ2Q9NRE2 1034 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 KANSL3Q9P2N6 904 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 STK39Q9UEW8 545 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 NR2E1Q9Y466 385 aa21.98■■□□□ 1.11
SREBF1-216ENST00000490796 CNTNAP2Q9UHC6 1331 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms