RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	SESN3	P58005	492 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	CD69	Q07108	199 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	PPARA	Q07869	468 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	R3HDM1	Q15032	1099 aa	Known RBP	5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	PDCD1	Q15116	288 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	PRKD1	Q15139	912 aa	Predicted RBP	5.89	□□□□□ -1.47
PHC3-212	ENST00000490723		Q6ZSN1	163 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	SGMS1	Q86VZ5	419 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	AFAP1L2	Q8N4X5	818 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	FAM89A	Q96GI7	184 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	C14orf93	Q9H972	538 aa	Known RBP	5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	MSL2	Q9HCI7	577 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	MYRF	Q9Y2G1	1151 aa		5.89	□□□□□ -1.47
PHC3-212	ENST00000490723	UBE2QL1	A1L167	161 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	BRINP1	O60477	761 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	JUN	P05412	331 aa	Known RBP	5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	GAA	P10253	952 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	KIR2DL3	P43628	341 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	ADAM8	P78325	824 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	TMPRSS15	P98073	1019 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	HHEX	Q03014	270 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	STAT4	Q14765	748 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	GAGE13	Q4V321	117 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	IQSEC1	Q6DN90	963 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	KRT26	Q7Z3Y9	468 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	ADGRE4P	Q86SQ3	457 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	PIK3C3	Q8NEB9	887 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	PRDM12	Q9H4Q4	367 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	IL23A	Q9NPF7	189 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	ING3	Q9NXR8	418 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	TMPRSS11E	Q9UL52	423 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	PRKAB1	Q9Y478	270 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	NUMBL	Q9Y6R0	609 aa		5.88	□□□□□ -1.47
PHC3-212	ENST00000490723	C1QTNF3-AMACR	E9PGA6	284 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	LY86	O95711	162 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	CPE	P16870	476 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	HIBADH	P31937	336 aa	Known RBP	5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	MGAT5	Q09328	741 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	TRIM25	Q14258	630 aa	Known RBP	5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	PITRM1	Q5JRX3	1037 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	LMBR1L	Q6UX01	489 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	MAMDC4	Q6UXC1	1216 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	LHFPL2	Q6ZUX7	228 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	CMIP	Q8IY22	773 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	EDA	Q92838	391 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	EAF2	Q96CJ1	260 aa	Predicted RBP	5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	TCF25	Q9BQ70	676 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	FAM126A	Q9BYI3	521 aa	Predicted RBP	5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	VTA1	Q9NP79	307 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	TLR9	Q9NR96	1032 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	PRSS50	Q9UI38	385 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	EDAR	Q9UNE0	448 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	SH3BP1	Q9Y3L3	701 aa		5.87	□□□□□ -1.47
PHC3-212	ENST00000490723	CAPN14	A8MX76	684 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	NRP2	O60462	931 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	ALDH1A2	O94788	518 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	VIL1	P09327	827 aa	Known RBP	5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	GPR15	P49685	360 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	LGALS4	P56470	323 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	NRG3	P56975	720 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	UGT8	Q16880	541 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	NRN1L	Q496H8	165 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	LCE5A	Q5TCM9	118 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	FAM111B	Q6SJ93	734 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	LYSMD2	Q8IV50	215 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	CMTM4	Q8IZR5	234 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	OR14C36	Q8NHC7	312 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	ATL2	Q8NHH9	583 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	PPP1R14C	Q8TAE6	165 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	TGFBRAP1	Q8WUH2	860 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	ARL8A	Q96BM9	186 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	WNT8A	Q9H1J5	351 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	KCTD10	Q9H3F6	313 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	EVL	Q9UI08	416 aa	Predicted RBP	5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	TESMIN	Q9Y4I5	508 aa		5.86	□□□□□ -1.47
PHC3-212	ENST00000490723	GOLGA8A	A7E2F4	631 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	MATN3	O15232	486 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	SEC24D	O94855	1032 aa	Predicted RBP	5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	EYA4	O95677	639 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	NPEPPS	P55786	919 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	SCAND1	P57086	179 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	USP39	Q53GS9	565 aa	Known RBP	5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	GLB1L2	Q8IW92	636 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	UNC5B	Q8IZJ1	945 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	WDR66	Q8TBY9	1149 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	ACAP3	Q96P50	834 aa		5.85	□□□□□ -1.47
PHC3-212	ENST00000490723	ELAVL1	Q15717	326 aa	Known RBP	5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	FSCN1	Q16658	493 aa	Known RBP	5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	CCDC178	Q5BJE1	867 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	FKBP15	Q5T1M5	1219 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	SLC41A1	Q8IVJ1	513 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	MSL3	Q8N5Y2	521 aa	Known RBP	5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	RSAD2	Q8WXG1	361 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	EXTL1	Q92935	676 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	MPHOSPH9	Q99550	1183 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	SPC25	Q9HBM1	224 aa		5.84	□□□□□ -1.47
PHC3-212	ENST00000490723	DPP7	Q9UHL4	492 aa		5.84	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms