RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 INO80B-WBP1J3KQ70 363 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 BAIAP3O94812 1187 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 GHRP10912 638 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 SYN1P17600 705 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 LIG1P18858 919 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 STRN3Q13033 797 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 PSMD2Q13200 908 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 HERC4Q5GLZ8 1057 aaPredicted RBP21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 CNKSR3Q6P9H4 555 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 APBB1IPQ7Z5R6 666 aaPredicted RBP21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 SCLYQ96I15 445 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 ST6GALNAC4Q9H4F1 302 aa21.89■■□□□ 1.09
SHROOM3-209ENST00000490690 KIF20AO95235 890 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 CSF2RAP15509 400 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 ZSCAN20P17040 1043 aaPredicted RBP21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 NCKAP1LP55160 1127 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 LPIN1Q14693 890 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 FAM187BQ17R55 369 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 PLEKHG4Q58EX7 1191 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 PPP4R3CPQ6ZMV5 832 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 CATSPER4Q7RTX7 472 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 KSR1Q8IVT5 923 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 CCDC51Q96ER9 411 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 EXOC1Q9NV70 894 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 ARHGAP28Q9P2N2 729 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 PCDHB13Q9Y5F0 798 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 ALPK3Q96L96 1907 aa21.88■■□□□ 1.09
SHROOM3-209ENST00000490690 NPHP3-ACAD11A0A0J9YXS1 232 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 K7ERI5 159 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 NBNO60934 754 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 CACNB1Q02641 598 aaPredicted RBP21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 IKBKEQ14164 716 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 STAMQ92783 540 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 GSDMAQ96QA5 445 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 PPP1R16BQ96T49 567 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 MRPL44Q9H9J2 332 aaKnown RBP21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 EXOC7Q9UPT5 735 aa21.87■■□□□ 1.09
SHROOM3-209ENST00000490690 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 EVPLQ92817 2033 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 ABHD14A-ACY1A0A1B0GW23 586 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 SFI1A8K8P3 1242 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 K7ENM7 598 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 ITGB8P26012 769 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 NFX1Q12986 1120 aaKnown RBP21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 CUL4BQ13620 913 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 KCNB1Q14721 858 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 BSNDQ8WZ55 320 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 SYAP1Q96A49 352 aaPredicted RBP21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 PADI3Q9ULW8 664 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 ST3GAL5Q9UNP4 418 aa21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 NOC2LQ9Y3T9 749 aaKnown RBP21.86■■□□□ 1.09
SHROOM3-209ENST00000490690 MKI67P46013 3256 aaKnown RBP21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 ACKR2O00590 384 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 FGBP02675 491 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 SKIP12755 728 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 MBTD1Q05BQ5 628 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 DPYDQ12882 1025 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 COASYQ13057 564 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 MBTPS1Q14703 1052 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 FAM26FQ5R3K3 315 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 HAUS6Q7Z4H7 955 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 DEFB128Q7Z7B8 93 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 FAM228AQ86W67 206 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 SFR1Q86XK3 245 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 TMEM161BQ8NDZ6 487 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 TMEM40Q8WWA1 233 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 SMARCE1Q969G3 411 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 BLZF1Q9H2G9 400 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 FZD8Q9H461 694 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 C1orf112Q9NSG2 853 aa21.85■■□□□ 1.09
SHROOM3-209ENST00000490690 UBE4BO95155 1302 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 DENND3A2RUS2 1198 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 EIF3DO15371 548 aaKnown RBP eCLIP21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 SLC16A4O15374 487 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 RPN1P04843 607 aaKnown RBP21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 PRKCBP05771 671 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 CD52P31358 61 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 MDM2Q00987 491 aaPredicted RBP21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 TMEM132AQ24JP5 1023 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 SKOR2Q2VWA4 1001 aaPredicted RBP21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 NOTUMQ6P988 496 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 ZNF720Q7Z2F6 126 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 DBF4BQ8NFT6 615 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 MRPL4Q9BYD3 311 aaKnown RBP21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 NUP62CLQ9H1M0 184 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 TMEM206Q9H813 350 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 CDHR5Q9HBB8 845 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 ERVK-5Q9HDB9 667 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 AGPAT5Q9NUQ2 364 aa21.84■■□□□ 1.09
SHROOM3-209ENST00000490690 DNAH12Q6ZR08 3092 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 H0YGN5 161 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 GCNT3O95395 438 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 PPP1R2P41236 205 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 MAGEA10P43363 369 aaPredicted RBP21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 RAB27AP51159 221 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 GTF2BQ00403 316 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 PRPF4BQ13523 1007 aaKnown RBP21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 HSP90AA2PQ14568 343 aaPredicted RBP21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 RSPH1Q8WYR4 309 aa21.83■■□□□ 1.09
SHROOM3-209ENST00000490690 ZNF668Q96K58 619 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms