RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 TBX4P57082 545 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 LRP8Q14114 963 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ACAP2Q15057 778 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 INAVAQ3KP66 663 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 RGL3Q3MIN7 710 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 EMC4Q5J8M3 183 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ESRP1Q6NXG1 681 aaKnown RBP6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 NLRX1Q86UT6 975 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 DTX1Q86Y01 620 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 AMOTL1Q8IY63 956 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 MYLIPQ8WY64 445 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 SEC14L1Q92503 715 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ZDHHC5Q9C0B5 715 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ASH2LQ9UBL3 628 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 ADAMTS6Q9UKP5 1117 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 CACNA1BQ00975 2339 aa6.28□□□□□ -1.4
SSX2IP-208ENST00000490476 F8W031 263 aaPredicted RBP6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 CA12O43570 354 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 TADA3O75528 432 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 CFBP00751 764 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 HPXP02790 462 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 CD40P25942 277 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 GDNFP39905 211 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 SLC6A11P48066 632 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 PHC1P78364 1004 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 LRRC32Q14392 662 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 PDCD1Q15116 288 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 FRMD7Q6ZUT3 714 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 MARCH10Q8NA82 808 aaPredicted RBP6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 ARRDC4Q8NCT1 418 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 RHOBTB2Q9BYZ6 727 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 C19orf73Q9NVV2 129 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 MSRAQ9UJ68 235 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 MRFAP1Q9Y605 127 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 TRPM7Q96QT4 1865 aa6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 KIAA0100Q14667 2235 aaKnown RBP6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 DICER1Q9UPY3 1922 aaKnown RBP6.27□□□□□ -1.41
SSX2IP-208ENST00000490476 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 GLTPD2A6NH11 291 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 NUDT19A8MXV4 375 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 FOXP2O15409 715 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 PRPF3O43395 683 aaKnown RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 ABLIM3O94929 683 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 C4BPAP04003 597 aaKnown RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 MMEP08473 750 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 DBHP09172 617 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 PNLIPP16233 465 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 GJA4P35212 333 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 TCIRG1Q13488 830 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 MLC1Q15049 377 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 NR0B2Q15466 257 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 CATSPEREQ5SY80 951 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 CYP4F22Q6NT55 531 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 NFXL1Q6ZNB6 911 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 COL23A1Q86Y22 540 aaPredicted RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 TPH2Q8IWU9 490 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 TRIM48Q8IWZ4 208 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 NETO2Q8NC67 525 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 PHOSPHO1Q8TCT1 267 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 POLR3GLQ9BT43 218 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 ANO3Q9BYT9 981 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 MBNL3Q9NUK0 354 aaKnown RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 GEMIN8Q9NWZ8 242 aaKnown RBP6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 NUDT5Q9UKK9 219 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 C5P01031 1676 aa6.26□□□□□ -1.41
SSX2IP-208ENST00000490476 LAMA3Q16787 3333 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 CCDC194A0A1B0GVG4 234 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 TCRBV5S2A0A599 114 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 FZD9O00144 591 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 APOL3O95236 402 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 CLEC2LP0C7M8 214 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 PF4V1P10720 104 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 SPINK2P20155 84 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 RECQLP46063 649 aaPredicted RBP6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 CD97P48960 835 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 EPHA5P54756 1037 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 ODF1Q14990 250 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 GPR158Q5T848 1215 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 TTLL7Q6ZT98 887 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 ZZZ3Q8IYH5 903 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 LILRA2Q8N149 483 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 HIPK4Q8NE63 616 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 LMBR1Q8WVP7 490 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 PEX11GQ96HA9 241 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 ZNF496Q96IT1 587 aaPredicted RBP6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 BCAS3Q9H6U6 928 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 PCMTD2Q9NV79 361 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 PAPPA2Q9BXP8 1791 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 CRB1P82279 1406 aa6.25□□□□□ -1.41
SSX2IP-208ENST00000490476 ANKRD30BQ9BXX2 1392 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 KLHL33A6NCF5 533 aa6.24□□□□□ -1.41
SSX2IP-208ENST00000490476 ACOT7O00154 380 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms