RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 COQ6Q9Y2Z9 468 aa3.54□□□□□ -1.84
UBXN4-208ENST00000490163 PCDHB1Q9Y5F3 818 aa3.54□□□□□ -1.84
UBXN4-208ENST00000490163 UGGT2Q9NYU1 1516 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 KRT1P04264 644 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 EEF1GP26641 437 aaKnown RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 POLE2P56282 527 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 NUP160Q12769 1436 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TTLL4Q14679 1199 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ADRM1Q16186 407 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 BAK1Q16611 211 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 IFIT1BQ5T764 474 aaKnown RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 MOGAT3Q86VF5 341 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 MYLK4Q86YV6 388 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 FMR1NBQ8N0W7 255 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 SSH3Q8TE77 659 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TOE1Q96GM8 510 aaKnown RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 MAP3K14Q99558 947 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 EPS8L2Q9H6S3 715 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 GPAMQ9HCL2 828 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TBC1D14Q9P2M4 693 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ACSL6Q9UKU0 697 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 MRFAP1Q9Y605 127 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 GPRASP1Q5JY77 1395 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 A0A0A6YYK5 440 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TRIM43BA6NCK2 446 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 F8W735 103 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 PRLP01236 227 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ALBP02768 609 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TP53P04637 393 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 GUCY1A3Q02108 690 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 CHRNDQ07001 517 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ZNF362Q5T0B9 420 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 PSAPL1Q6NUJ1 521 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 C1orf228Q6PIY5 440 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 BTNL9Q6UXG8 535 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TMC3Q7Z5M5 1100 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 GPR161Q8N6U8 529 aaKnown RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 PHOSPHO1Q8TCT1 267 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 HDAC2Q92769 488 aaKnown RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ACDQ96AP0 544 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 TRIM43Q96BQ3 446 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 SOX7Q9BT81 388 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 LRRC27Q9C0I9 530 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 CWC25Q9NXE8 425 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-208ENST00000490163 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 ADCY10Q96PN6 1610 aa3.53□□□□□ -1.84
UBXN4-208ENST00000490163 C7orf72A4D263 438 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 NOTOA8MTQ0 251 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 F8W8V4 182 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 H7C1D1 291 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 TOR1BO14657 336 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PHGDHO43175 533 aaKnown RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 WISP1O95388 367 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 FAM200BP0CF97 657 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SLC6A9P48067 706 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 ALDH9A1P49189 494 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CLK1P49759 484 aaKnown RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 RAB1AP62820 205 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 BIRC3Q13489 604 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 ACVR2BQ13705 512 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CRY1Q16526 586 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 NAA35Q5VZE5 725 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 LIN54Q6MZP7 749 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CCDC129Q6ZRS4 1044 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 LRRTM4Q86VH4 590 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 TSPYL5Q86VY4 417 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CXorf38Q8TB03 319 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 KLHDC4Q8TBB5 520 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CFHR4Q92496 578 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SMAD5Q99717 465 aaKnown RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PRKRIP1Q9H875 184 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 GFOD1Q9NXC2 390 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CA14Q9ULX7 337 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 EFCAB5A4FU69 1503 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 A0A1W2PR48 441 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SHISA3A0PJX4 238 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PRSS29PA6NIE9 313 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SRSF11Q05519 484 aaKnown RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 NOGQ13253 232 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 PUM1Q14671 1186 aaKnown RBP eCLIP3.52□□□□□ -1.853e-12■□□□□ 9.9
UBXN4-208ENST00000490163 CNGA2Q16280 664 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 THEMIS2Q5TEJ8 643 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SV2AQ7L0J3 742 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 RASGRP2Q7LDG7 609 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 MAML1Q92585 1016 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 BTBD6Q96KE9 485 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 HEXIM2Q96MH2 286 aaKnown RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SYT17Q9BSW7 474 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 EPB41L4AQ9HCS5 686 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.52□□□□□ -1.854e-7■■■■□ 20
UBXN4-208ENST00000490163 GRHPRQ9UBQ7 328 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 GRIN2BQ13224 1484 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 ZNF608Q9ULD9 1512 aaPredicted RBP3.52□□□□□ -1.85
UBXN4-208ENST00000490163 CCDC196A0A1B0GTZ2 297 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 MTA2O94776 668 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 IL18RAPO95256 599 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 NPR1P16066 1061 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 LIFRP42702 1097 aa3.52□□□□□ -1.85
UBXN4-208ENST00000490163 SNW1Q13573 536 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms