RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SORCS3Q9UPU3 1222 aa17.82■□□□□ 0.44
PLOD3-216ENST00000489927 INPP5FQ9Y2H2 1132 aa17.82■□□□□ 0.44
PLOD3-216ENST00000489927 IRAK3Q9Y616 596 aa17.82■□□□□ 0.44
PLOD3-216ENST00000489927 DEXIO95424 95 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 BRD1O95696 1058 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 GALTP07902 379 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 CTSAP10619 480 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 SKIP12755 728 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 EPCAMP16422 314 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 MTHFRP42898 656 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
PLOD3-216ENST00000489927 MTMR3Q13615 1198 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 NOMO2Q5JPE7 1267 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 PLA2G4FQ68DD2 849 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 MOXD1Q6UVY6 613 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 CATSPER4Q7RTX7 472 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
PLOD3-216ENST00000489927 DAGLBQ8NCG7 672 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
PLOD3-216ENST00000489927 SMOC2Q9H3U7 446 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 ZSWIM6Q9HCJ5 1215 aa17.81■□□□□ 0.44
PLOD3-216ENST00000489927 DDX25Q9UHL0 483 aaKnown RBP17.81■□□□□ 0.44
PLOD3-216ENST00000489927 CPLX1O14810 134 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 SLC37A4O43826 429 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 B4GALT3O60512 393 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 ZNF623O75123 536 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 OFD1O75665 1012 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 REC8O95072 547 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 RAB27AP51159 221 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 PSMC5P62195 406 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
PLOD3-216ENST00000489927 NONOQ15233 471 aaKnown RBP eCLIP17.8■□□□□ 0.44
PLOD3-216ENST00000489927 UBALD2Q8IYN6 164 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 VN1R3Q9BXE9 311 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 CYP26B1Q9NR63 512 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 DZANK1Q9NVP4 752 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 DNAJB4Q9UDY4 337 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 DMDP11532 3685 aa17.8■□□□□ 0.44
PLOD3-216ENST00000489927 EML1O00423 815 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 ASGR2P07307 311 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 NPEPPSP55786 919 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 GIT2Q14161 759 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 INF2Q27J81 1249 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 GALNT17Q6IS24 598 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 KIAA1841Q6NSI8 718 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 ZNF280BQ86YH2 543 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
PLOD3-216ENST00000489927 FEZF2Q8TBJ5 459 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 SLC22A17Q8WUG5 538 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 ZNF274Q96GC6 653 aaPredicted RBP17.79■□□□□ 0.44
PLOD3-216ENST00000489927 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
PLOD3-216ENST00000489927 GBP3Q9H0R5 595 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 AGPAT5Q9NUQ2 364 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 VAV3Q9UKW4 847 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 PCDHB2Q9Y5E7 798 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 CYP46A1Q9Y6A2 500 aa17.79■□□□□ 0.44
PLOD3-216ENST00000489927 CARNS1A5YM72 827 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 QARSP47897 775 aaKnown RBP17.78■□□□□ 0.44
PLOD3-216ENST00000489927 SLC11A1P49279 550 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 STK3Q13188 491 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 LETM2Q2VYF4 491 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 ATAT1Q5SQI0 421 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 TMC5Q6UXY8 1006 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 KRT25Q7Z3Z0 450 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 TDRD5Q8NAT2 981 aaKnown RBP17.78■□□□□ 0.44
PLOD3-216ENST00000489927 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 ATOH1Q92858 354 aaPredicted RBP17.78■□□□□ 0.44
PLOD3-216ENST00000489927 PGBD4Q96DM1 585 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 WRAP73Q9P2S5 460 aaPredicted RBP17.78■□□□□ 0.44
PLOD3-216ENST00000489927 LIMD1Q9UGP4 676 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
PLOD3-216ENST00000489927 KCNJ14Q9UNX9 436 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 COL4A3BPQ9Y5P4 624 aa17.78■□□□□ 0.44
PLOD3-216ENST00000489927 H0Y858 1186 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 AFF1P51825 1210 aaKnown RBP17.77■□□□□ 0.44
PLOD3-216ENST00000489927 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 CABP7Q86V35 215 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
PLOD3-216ENST00000489927 URGCPQ8TCY9 931 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 PRPF31Q8WWY3 499 aaKnown RBP17.77■□□□□ 0.44
PLOD3-216ENST00000489927 IRF2BPLQ9H1B7 796 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 SLKQ9H2G2 1235 aaPredicted RBP17.77■□□□□ 0.44
PLOD3-216ENST00000489927 MINDY3Q9H8M7 445 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 KCNMB3Q9NPA1 279 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 USTQ9Y2C2 406 aa17.77■□□□□ 0.44
PLOD3-216ENST00000489927 ST18O60284 1047 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 DDHD2O94830 711 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 HOXA11P31270 313 aaPredicted RBP17.76■□□□□ 0.43
PLOD3-216ENST00000489927 NUBP1P53384 320 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
PLOD3-216ENST00000489927 MRPL10Q7Z7H8 261 aaKnown RBP17.76■□□□□ 0.43
PLOD3-216ENST00000489927 TMEM105Q8N8V8 129 aa17.76■□□□□ 0.43
PLOD3-216ENST00000489927 TMEM143Q96AN5 459 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms