RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 WNT10BO00744 389 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 HSD17B3P37058 310 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 RPS6P62753 249 aaKnown RBP17.02■□□□□ 0.32
BRD9-208ENST00000489816 MTMR1Q13613 665 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 XKR9Q5GH70 373 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 MCTP2Q6DN12 878 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 CENPFP49454 3210 aa17.02■□□□□ 0.32
BRD9-208ENST00000489816 GOLGA8KD6RF30 607 aa17.02■□□□□ 0.31
BRD9-208ENST00000489816 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.31
BRD9-208ENST00000489816 CTNNA1P35221 906 aaKnown RBP17.02■□□□□ 0.31
BRD9-208ENST00000489816 LMBRD2Q68DH5 695 aaPredicted RBP17.02■□□□□ 0.31
BRD9-208ENST00000489816 HAUS6Q7Z4H7 955 aa17.02■□□□□ 0.31
BRD9-208ENST00000489816 OLIG1Q8TAK6 271 aa17.02■□□□□ 0.31
BRD9-208ENST00000489816 SH3GL2Q99962 352 aa17.02■□□□□ 0.31
BRD9-208ENST00000489816 LARSQ9P2J5 1176 aaKnown RBP17.02■□□□□ 0.31
BRD9-208ENST00000489816 ZNF536O15090 1300 aa17.02■□□□□ 0.31
BRD9-208ENST00000489816 CYP26A1O43174 497 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 SGPL1O95470 568 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 RARRES1P49788 294 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 VAMP7P51809 220 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 ODF2Q5BJF6 829 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 ALS2CLQ60I27 953 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 RPUSD2Q8IZ73 545 aaKnown RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 TTLL6Q8N841 843 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 SLC30A5Q8TAD4 765 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 DCDC2CA8MYV0 355 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 DLATP10515 647 aaKnown RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 ECHS1P30084 290 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 PI4K2AQ9BTU6 479 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 NDUFAB1O14561 156 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 DPEP1P16444 411 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 UAP1Q16222 522 aaPredicted RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 TKFCQ3LXA3 575 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 STXBP4Q6ZWJ1 553 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 PBKQ96KB5 322 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 HSPBP1Q9NZL4 362 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 TMEM59LQ9UK28 342 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 CTDP1Q9Y5B0 961 aaPredicted RBP17.01■□□□□ 0.31
BRD9-208ENST00000489816 GRIN2DO15399 1336 aa17.01■□□□□ 0.31
BRD9-208ENST00000489816 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
BRD9-208ENST00000489816 TMOD1P28289 359 aa17■□□□□ 0.31
BRD9-208ENST00000489816 FKBP1AP62942 108 aaKnown RBP17■□□□□ 0.31
BRD9-208ENST00000489816 CXCL9Q07325 125 aa17■□□□□ 0.31
BRD9-208ENST00000489816 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
BRD9-208ENST00000489816 SLC47A2Q86VL8 602 aa17■□□□□ 0.31
BRD9-208ENST00000489816 PTPN22Q9Y2R2 807 aa17■□□□□ 0.31
BRD9-208ENST00000489816 RIPK3Q9Y572 518 aa17■□□□□ 0.31
BRD9-208ENST00000489816 ANKRD63C9JTQ0 380 aa17■□□□□ 0.31
BRD9-208ENST00000489816 DHX15O43143 795 aaKnown RBP17■□□□□ 0.31
BRD9-208ENST00000489816 PEX10O60683 326 aa17■□□□□ 0.31
BRD9-208ENST00000489816 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
BRD9-208ENST00000489816 LIG3P49916 1009 aa17■□□□□ 0.31
BRD9-208ENST00000489816 ZNF131P52739 623 aa17■□□□□ 0.31
BRD9-208ENST00000489816 DHX9Q08211 1270 aaKnown RBP17■□□□□ 0.31
BRD9-208ENST00000489816 LMBR1Q8WVP7 490 aa17■□□□□ 0.31
BRD9-208ENST00000489816 RFFLQ8WZ73 363 aa17■□□□□ 0.31
BRD9-208ENST00000489816 RASSF4Q9H2L5 321 aa17■□□□□ 0.31
BRD9-208ENST00000489816 DMAC2Q9NW81 257 aa17■□□□□ 0.31
BRD9-208ENST00000489816 SNX24Q9Y343 169 aa17■□□□□ 0.31
BRD9-208ENST00000489816 ALG6Q9Y672 507 aa17■□□□□ 0.31
BRD9-208ENST00000489816 TLDC2A0PJX2 215 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
BRD9-208ENST00000489816 ADRB2P07550 413 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 LMNB1P20700 586 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 MTMR2Q13614 643 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 UBAP2Q5T6F2 1119 aaKnown RBP16.99■□□□□ 0.31
BRD9-208ENST00000489816 DAB2IPQ5VWQ8 1189 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 RMDN3Q96TC7 470 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 EHMT1Q9H9B1 1298 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 EIF3HO15372 352 aaKnown RBP eCLIP16.99■□□□□ 0.313e-8■□□□□ 8.6
BRD9-208ENST00000489816 NR1D1P20393 614 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 QARSP47897 775 aaKnown RBP16.99■□□□□ 0.31
BRD9-208ENST00000489816 PLTPP55058 493 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 PRKG1Q13976 671 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 CLEC4DQ8WXI8 215 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 PCDHB18PQ96TA0 734 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 ISCUQ9H1K1 167 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 ASNSP08243 561 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 KCNJ1P48048 391 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 LLGL2Q6P1M3 1020 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 LMO3Q8TAP4 145 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 SYTL5Q8TDW5 730 aaPredicted RBP16.99■□□□□ 0.31
BRD9-208ENST00000489816 SEMA4DQ92854 862 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 C18orf8Q96DM3 657 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 FEM1BQ9UK73 627 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 STXBP5LQ9Y2K9 1186 aa16.99■□□□□ 0.31
BRD9-208ENST00000489816 TCRBV7S2A1N4TA0A589 114 aa16.98■□□□□ 0.31
BRD9-208ENST00000489816 HES6Q96HZ4 224 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms